Author

Badong Chen

Xi'an Jiaotong UniversityORCID 0000-0003-1710-3818Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Research Focus:clustering· 1 Approach:contrastive learning· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Approach:graph neural network· 1 Organism:human· 1

Frequent Co-Authors

Baojuan Li AiD· 1 shared Dewen HuiD· 1 shared Hong-Bin SheniD· 1 shared Hongbing LuiD· 1 shared Huaning WangiD· 1 shared Kaizhong ZhengiD· 1 shared Shengfan WangiD· 1 shared Weimin ZhuiD· 1 shared

Activity by Year

2022-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperNeuroscience

Baojuan Li AORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintOct 2, 2026

Auditing Protein-Protein Interaction Signals with Sparse Autoencoder Fingerprints

Weimin Zhu, Shengfan Wang, Xiaojian Liu…·Xiaoyong Pan

AuditPPI evaluates PPI predictors by transforming language model features into auditable fingerprints, revealing that predictive success does not necessarily reflect biological signal capture.

DOI 10.64898/2026.09.27.754758

protein sequencestatistical model

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NeurosciencebioRxivPreprintJun 7, 2022

Redefining and subtyping of major depression based on brain functional connectivity signatures with high generalization: an ensemble hybrid framework

Kaizhong Zheng, Hongbing Lu, Yuxia Wu…·Baojuan Li A

This paper proposes a deep learning framework to subtype major depression using brain functional connectivity, achieving 75% generalization accuracy across multiple sites.

1 citation

humanimaging

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