Author

Takumasa Kondo

Corporación Colombiana de Investigación Agropecuaria – AGROSAVIAORCID 0000-0003-3192-329XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Evolutionary Biology· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Assay:whole-genome sequencing· 2 Organism:bacteria (other)· 1 Research Focus:chromatin & epigenetic regulation· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Filip HusníkiD· 2 shared Hirotaka TanakaiD· 2 shared Jinyeong ChoiiD· 2 shared Matthew E. GruwelliD· 2 shared Pradeep PalanichamyiD· 2 shared Cong LiuiD· 1 shared Yumiko MasukagamiiD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 21 mutual co-author links

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2 shared papersEvolutionary Biology

Filip HusníkORCID

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2 papers

Recent·Most cited

Evolutionary BiologyThe ISME JournalPeer-reviewedJan 1, 2026

Parallel Evolution of Bacteroidota as Long-Term Endosymbionts of Insects

Jinyeong Choi, Cong Liu, Pradeep Palanichamy…·Filip Husník

This study examines the parallel evolution of Bacteroidota as insect endosymbionts, showing genomic and cellular changes across multiple scale insect lineages.

2 citationstop 4%

DNA methylationwhole-genome sequencing

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GenomicsMolecular Biology and EvolutionPeer-reviewedMay 29, 2025

Accelerated pseudogenization in ancient endosymbionts of giant scale insects

Jinyeong Choi, Pradeep Palanichamy, Hirotaka Tanaka…·Filip Husník

The paper shows that ancient endosymbionts of giant scale insects experience accelerated pseudogenization due to genomic degradation and co-symbiont acquisitions.

10 citationstop 2%

bacteria (other)whole-genome sequencing

𝕏 PostBluesky