Author

Tingting Zhao

Bryant UniversityORCID 0000-0003-3787-2016Unclaimed ORCID profile · follow to get notified of new preprints

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Tingting Zhao1 paper

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1

Frequent Co-Authors

Arslan ErdengasilengiD· 1 shared Ben Lee· 1 shared Donghu Sun· 1 shared Eric ZhouiD· 1 shared Feng PaniD· 1 shared Guangyu ZhuiD· 1 shared Harsh Vardhan DubeyiD· 1 shared Henry Chung· 1 shared

Activity by Year

2023-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperBioinformatics

Arslan ErdengasilengORCID

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2 papers

Recent·Most cited

iKraph: a comprehensive, high-quality biomedical knowledge graph for AI-powered, data-driven biomedical research

Yuan Zhang, Xin Sui, Feng Pan, Kaixian Yu, Keqiao Li, Shubo Tian, Arslan Erdengasileng, Qing Han, Wanjing Wang, Jianan Wang, Jian Wang, Donghu Sun, Henry Chung, Jun Zhou, Eric Zhou, , Jinfeng Zhang

The paper constructs a comprehensive biomedical knowledge graph (iKraph) using PubMed abstracts and integrates it with public databases to enable AI-powered knowledge discovery, demonstrating its utility in drug repurposing.

Nature Machine Intelligence · Mar 17, 2025Peer-reviewedBioinformatics

Identification of Significant Gene Expression Changes in Multiple Perturbation Experiments using Knockoffs

Tingting Zhao, Guangyu Zhu, Harsh Vardhan Dubey, Patrick Flaherty

The paper introduces a method to identify significant gene expression changes in multiple perturbation experiments using knockoffs and applies it to data from the LINCS program.

Briefings in Bioinformatics · Feb 18, 2023Peer-reviewedBioinformatics