Author

Liwen Sun

Duke UniversityORCID 0000-0003-4666-0509Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:gene regulatory network inference· 2 Research Focus:benchmarking· 1 Research Focus:cell-cell communication· 1 Assay:CITE-seq· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Organism:human· 1 Approach:machine learning (classical)· 1

Frequent Co-Authors

Lin LiniD· 2 shared Jingxuan ZhangiD· 1 shared Jingxuan ZhangiD· 1 shared Neal ReadyiD· 1 shared Qianyu Yang· 1 shared Wenbo GuoiD· 1 shared Wenbo GuoiD· 1 shared

Activity by Year

2025-2025 · peak 2/yr

Co-Author Collaboration Network

7 top collaborators · 12 mutual co-author links

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2 shared papersBioinformatics

Lin LinORCID

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2 papers

Recent·Most cited

cytoGPNet: Enhancing Clinical Outcome Prediction Accuracy Using Longitudinal Cytometry Data in Small Cohort Studies

Jingxuan Zhang, Liwen Sun, Neal Ready, Wenbo Guo, Lin Lin

cytoGPNet improves clinical outcome prediction using longitudinal cytometry data in small cohorts by addressing challenges in sample variability, temporal analysis, robustness, and interpretability.

Patterns · Jun 25, 2025Peer-reviewedBioinformatics

eSPred: Explainable scRNA-seq Prediction via Customized Foundation Models and Pathway-Aware Fine-tuning

Liwen Sun, Qianyu Yang, Jingxuan Zhang, Wenbo Guo, Lin Lin

eSPred improves subject-level prediction from scRNA-seq by integrating cell-type and pathway information, enhancing accuracy and linking to disease mechanisms.

bioRxiv · May 14, 2025 · PreprintBioinformatics