Author

Valmik Ranparia

University of Southern CaliforniaORCID 0009-0002-0392-7269Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Research Focus:database / resource· 1 Assay:DNA methylation· 1 Research Focus:gene regulatory network inference· 1 Assay:Hi-C· 1 Organism:human· 1 Approach:machine learning (classical)· 1 Research Focus:software / tool· 1 Approach:statistical model· 1

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Geoffrey FudenbergiD· 1 shared Mark ChaissoniD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

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2 top collaborators · 1 mutual co-author link

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1 shared paperGenomics

Geoffrey FudenbergORCID

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1 paper

Recent·Most cited

CLASH (Chromatin Loop Across-sample Score Harmonizer) quantifies the relative contributions of genetic variation, methylation, and CTCF occupancy on chromatin loop strength across individuals

Valmik Ranparia, Geoffrey Fudenberg, Mark Chaisson

The paper introduces CLASH, a method to quantify how genetic variation, methylation, and CTCF occupancy affect chromatin loop strength across individuals.

bioRxiv · Jun 4, 2026 · PreprintGenomics