Author

Pradeep Bashyal

National Marrow Donor ProgramORCID 0009-0002-0889-2368Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2 Genetics· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Organism:human· 2 Research Focus:database / resource· 1 Assay:DNA methylation· 1 Approach:graph neural network· 1 Research Focus:imputation· 1 Research Focus:variant calling· 1 Research Focus:variant effect prediction· 1

Frequent Co-Authors

Loren A. GragertiD· 3 shared Martin J. MaiersiD· 3 shared Yoram LouzouniD· 2 shared Abeer S. MadboulyiD· 1 shared Amit Kabya· 1 shared Jane H. Kempenich· 1 shared Jason Brelsford· 1 shared Joel SchneideriD· 1 shared

Activity by Year

2019-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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3 shared papersBioinformatics

Loren A. GragertORCID

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3 papers

Recent·Most cited

GRIMM-II: A Two-Stage Real-Time Algorithm for Nine-Locus HLA Imputation and Matching with Up to Three Mismatches

Ofek Kirshenboim, Amit Kabya, Regev Yehezkel-Imra, Yuli Tshuva, Martin J. Maiers, Loren A. Gragert, Pradeep Bashyal, Sapir Israeli, Yoram Louzoun

GRIMM-II improves HLA donor matching by imputing nine loci and identifying donors with up to three mismatches in real-time.

Human Immunology · Aug 9, 2026Peer-reviewedBioinformatics

Classical HLA Allele and Haplotype Frequency Estimates in US Populations

Loren A. Gragert, Abeer S. Madbouly, Pradeep Bashyal, Kim Wadsworth, Jane H. Kempenich, Yung‐Tsi Bolon, Martin J. Maiers

The paper estimates HLA allele and haplotype frequencies in US populations using large-scale genotyping data, revealing population-specific diversity and shared haplotypes.

Human Immunology · Jun 24, 2026Peer-reviewedGenetics

GRIMM: GRaph IMputation and Matching for HLA Genotypes

Martin J. Maiers, Michael S. Halagan, Loren A. Gragert, Pradeep Bashyal, Jason Brelsford, Joel Schneider, Polina Lutsker, Yoram Louzoun

GRIMM improves HLA genotype matching efficiency using a graph database, achieving faster runtime and agreement with consensus outputs on a validation dataset.

Bioinformatics · Jan 23, 2019Peer-reviewedBioinformatics