Author

Allison C Ea

University of California, IrvineORCID 0009-0004-6088-2348Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Microbiology· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Approach:deep learning· 1 Assay:metagenomics· 1

Frequent Co-Authors

Achuthan AmbatiD· 1 shared Ana M. EspeletaiD· 1 shared Beverly FuiD· 1 shared David A. RelmaniD· 1 shared Handuo ShiiD· 1 shared Katherine S. XueiD· 1 shared Kerwyn Casey HuangiD· 1 shared Rachel L. PorteriD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 28 mutual co-author links

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1 shared paperMicrobiology

Achuthan AmbatORCID

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1 paper

Recent·Most cited

MicrobiologybioRxivPreprintMay 21, 2026

CUPID-seq enables highly multiplexed amplicon sequencing via combinatorial in-line dual indexing

Beverly Fu, Rachel L. Porter, Handuo Shi…·Katherine S. Xue

CUPID-seq improves amplicon sequencing by reducing costs and increasing multiplexing through combinatorial indexing, enabling efficient use of high-throughput sequencing platforms.

DOI 10.64898/2026.05.20.726713

metagenomicsdeep learning

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