Author

Shray Vats

Boston UniversityORCID 0009-0004-9244-7957Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:deep learning· 2 Research Focus:protein folding & dynamics· 2 Assay:protein structure· 2 Approach:statistical model· 2 Assay:cryo-EM· 1 Organism:human· 1 Approach:machine learning (classical)· 1

Frequent Co-Authors

Andreas MardtiD· 2 shared Soumendranath BhakatiD· 2 shared Alexei DegtereviD· 1 shared Eva‐Maria StrauchiD· 1 shared

Activity by Year

2025-2025 · peak 2/yr

Co-Author Collaboration Network

4 top collaborators · 5 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersBiophysics

Andreas MardtORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

CryoPhold: CryoEM meets AlphaFold and molecular simulation to reveal protein dynamics

Soumendranath Bhakat, Shray Vats, Andreas Mardt, Eva‐Maria Strauch

CryoPhold integrates AlphaFold, cryo-EM, and molecular simulations to predict protein dynamics and structural hotspots in human proteins like GlyT1 and BRAF mutants.

bioRxiv · Sep 12, 2025 · PreprintBiophysics

Generalizable Protein Dynamics in Kinases: Physics is the key

Soumendranath Bhakat, Shray Vats, Andreas Mardt, Alexei Degterev

This paper introduces a computational framework to study kinase conformational dynamics by integrating AlphaFold, machine learning, and physics-based simulations to explore metastable states beyond traditional binary classifications.

bioRxiv · Mar 6, 2025 · PreprintBiophysics