Author

Jie Yun

Massachusetts Institute of TechnologyORCID 0009-0008-0666-1789Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Plant Biology· 2

Signature Assays, Organisms & Methods

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Organism:plant (other)· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:gene regulatory network inference· 1 Assay:imaging· 1 Approach:machine learning (classical)· 1 Approach:statistical model· 1

Frequent Co-Authors

David L. Des MaraisiD· 2 shared Alistair RogersiD· 1 shared Angela C. BurnettiD· 1 shared Chenyang YuaniD· 1 shared Eldar Urkumbayev· 1 shared Katherine Irelan· 1 shared Marie-Jeanne Kabongo· 1 shared

Activity by Year

2025-2025 · peak 2/yr

Co-Author Collaboration Network

7 top collaborators · 13 mutual co-author links

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2 shared papersPlant Biology

David L. Des MaraisORCID

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2 papers

Recent·Most cited

Plant BiologyMolecular Biology and EvolutionPeer-reviewedSep 11, 2025

Genotype by environment interactions in gene regulation underlie the response to soil drying in the model grass Brachypodium distachyon

Jie Yun, Angela C. Burnett, Alistair Rogers, David L. Des Marais

The paper identifies genotype by environment interactions in gene regulation in Brachypodium distachyon under soil drying conditions, revealing conserved and variable gene regulatory networks.

6 citations

plant (other)bulk RNA-seq

Plant BiologyJournal of Experimental BotanyPeer-reviewedJul 31, 2025

Does domestication trade-off stress tolerance for leaf growth? A search for evidence across eight Pooideae grass species

Jie Yun, Chenyang Yuan, Katherine Irelan…·David L. Des Marais

The paper examines trade-offs between domestication and drought response in leaf growth across eight Pooideae grass species using machine learning to analyze leaf cell kinematics.

3 citations

plant (other)imaging