Biomedical Signal Processing and ControlBioengineeringPeer-reviewed journal article
Refined Myocardium Segmentation from CT Using a Hybrid-Fusion Transformer
Shihua QiniD, Fangxu XingiD, Jihoon Cho, Jinah Park, Xiaofeng Liu, Amir RouhollahiiD, Elias Bou FarhatiD, Hoda JavadikasgariiD, Ashraf A. SabeiD, Farhad R. NezamiiD, Jonghye WooiD, Iman AganjiD
Abstract
1.Accurate segmentation of the left ventricle (LV) in cardiac CT images is crucial for assessing ventricular function and diagnosing cardiovascular diseases. Creating a sufficiently large training set with accurate manual labels of LV can be cumbersome. More efficient semi-automatic segmentation, however, often includes unwanted structures, such as papillary muscles, due to low contrast between the LV wall and surrounding tissues. This study introduces a two-input-channel method within a Hybrid-Fusion Transformer deep-learning framework to produce refined LV labels from a combination of CT images and semi-automatic rough labels, effectively removing papillary muscles. By leveraging the efficiency of semi-automatic LV segmentation, we train an automatic refined segmentation model on a small set of images with both refined manual and rough semi-automatic labels. Evaluated through quantitative cross-validation, our method outperformed models that used only either CT images or rough masks as input.
- assay: imaging
- research focus: cell type annotation
- research focus: clustering
- research focus: spatial domain detection
- approach: deep learning
- approach: transformer / foundation model
- Citations
- 0
- FWCI
- 0.00
- Field percentile
- 6th percentile
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