A Regression Framework for Brain Network Distance Metrics
Chal E. TomlinsoniD, Paul J. LaurientiiD, Robert G. LydayiD, Sean L. SimpsoniD
Abstract
Analyzing brain networks has long been a prominent research topic in neuroimaging. However, statistical methods to detect differences between these networks and relate them to phenotypic traits are still sorely needed. Our previous work developed a novel permutation testing framework to detect differences between two groups. Here we advance that work to allow both assessing differences by continuous phenotypes and controlling for confounding variables. To achieve this, we propose an innovative regression framework to relate distances between brain network features to functions of absolute differences in continuous covariates and indicators of difference for categorical variables. We explore several similarity metrics for comparing distances between connection matrices, and adapt several standard methods for estimation and inference within our framework: Standard F-test, F-test with individual level effects (ILE), Feasible Generalized Least Squares (FGLS), and Permutation. Via simulation studies, we assess all approaches for estimation and inference while comparing them with existing Multivariate Distance Matrix Regression (MDMR) methods. We then illustrate the utility of our framework by analyzing the relationship between fluid intelligence and brain network distances in Human Connectome Project (HCP) data. HighlightsO_LIRelated distances between connection matrices to differences in covariates. C_LIO_LIAdapted methods for estimation and inference in this framework. C_LIO_LIAssessment of methods and distance metrics via simulation. C_LIO_LICompared our methods to existing MDMR methods via simulation. C_LIO_LIAnalysis of the HCP data with the best approach for each distance metric. C_LI
02 /Specification & Classification
Click any tag to browse matching papers- Citations
- 15
- FWCI
- 1.45
- Field percentile
- top 20%
- Organism
- Assay
- Research Focus
- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Connectivity Regression
Neel Desai, Veerabhadran Baladandayuthapani, … Jeffrey S. Morris·BiostatisticsPeer-reviewed·Dec 31, 2024
- Kernel machine tests of association between brain networks and phenotypes
Alexandria M. Jensen, Jason R. Tregellas, … Debashis Ghosh·PLoS ONEPeer-reviewed·Mar 21, 2019
- BRAPH: A Graph Theory Software for the Analysis of Brain Connectivity
Mite Mijalkov, Ehsan Kakaei, … Alzheimer’s Disease Neuroimaging Initiative·PLoS ONEPeer-reviewed·Aug 1, 2017
- BrainNET: Inference of brain network topology using Machine Learning
G. K. Murugesan, S. Nalawade, … J. A. Maldjian·bioRxiv·Feb 16, 2020
- Group-level inference of information-based measures for the analyses of cognitive brain networks from neurophysiological data
Etienne Combrisson, Michele Allegra, … Andrea Brovelli·NeuroImagePeer-reviewed·May 31, 2022
- How Similar Are Two Brains? A Comprehensive Benchmark of Brain Network Similarity Measures
Adrian Dendorfer, Andrea I. Luppi, … Kayson Fakhar·bioRxiv·Sep 22, 2026