Journal of NeurophysiologyNeurosciencePeer-reviewed journal article
The Oscillatory ReConstruction Algorithm (ORCA) adaptively identifies frequency bands to improve spectral decomposition in human and rodent neural recordings
Abstract
Neural oscillations are routinely analyzed using methods that measure activity in canonical frequency bands (e.g. alpha, 8-12 Hz), though the frequency of neural signals is not fixed and varies within and across individuals based on numerous factors including neuroanatomy, behavioral demands, and species. Further, band-limited activity is an often assumed, typically unmeasured model of neural activity and band definitions vary considerably across studies. These factors together mask individual differences and can lead to noisy spectral estimates and interpretational problems when linking electrophysiology to behavior. We developed the Oscillatory ReConstruction Algorithm ("ORCA"), an unsupervised method to measure the spectral characteristics of neural signals in adaptively identified bands which incorporates two new methods for frequency band identification. ORCA uses the instantaneous power, phase, and frequency of activity in each band to reconstruct the signal and directly quantify spectral decomposition performance using each of four different models. To reduce researcher bias, ORCA provides spectral estimates derived from the best model and requires minimal hyperparameterization. Analyzing human scalp EEG data during eyes open and eyes-closed "resting" conditions, we first identify variability in the frequency content of neural signals across subjects and electrodes. We demonstrate that ORCA significantly improves spectral decomposition compared to conventional methods and captures the well-known increase in low-frequency activity during eyes closure in electrode- and subject-specific frequency bands. We further illustrate the utility of our method in rodent CA1 recordings. ORCA is a novel analytic tool that will allow researchers to investigate how non-stationary neural oscillations vary across behaviors, brain regions, individuals, and species.
- organism: human
- organism: mouse
- assay: electronic health records
- research focus: dimensionality reduction
- approach: statistical model
- Citations
- 11
- FWCI
- 0.94
- Field percentile
- top 29%
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- An iterative search algorithm to identify oscillatory dynamics in neurophysiological time series
Amanda M. Beck, Mingjian He, … Patrick L. Purdon·bioRxiv·Oct 30, 2022
- A waveform-independent measure of recurrent neural activity
Immo Weber, Carina Renate Oehrn·Frontiers in NeuroinformaticsPeer-reviewed·Mar 7, 2022
- Frequency and power of human alpha oscillations drift systematically with time-on-task
Christopher Benwell, Raquel E. London, … Gregor Thut·NeuroImagePeer-reviewed·Mar 4, 2019
- Separating neural oscillations from aperiodic 1/f activity: challenges and recommendations
Moritz Gerster, Gunnar Waterstraat, … Vadim V. Nikulin·NeuroinformaticsPeer-reviewed·Apr 7, 2022
- Parameterizing neural power spectra
Thomas Donoghue, Matar Haller, … Bradley Voytek·Nature NeurosciencePeer-reviewed·Nov 23, 2020
- sBOSC: A method for source-level identification of neural oscillations in electromagnetic brain signals
Enrique Stern, Guiomar Niso, Almudena Capilla·PsychophysiologyPeer-reviewed·Jun 1, 2026