Identification and Diagnostic Potential of Pyroptosis-Related Genes in Endometriosis: A Novel Bioinformatics Analysis
P.S. Teng, Li WangiD, Caiyun Ding, Kaili Gu, Xianchen Luo, Chang SuiD, Guantai NiiD, Yuanyuan Lyu, Jin DingiD
Abstract
ObjectiveThis study aimed to identify and analyze potential signatures of pyroptosis-related genes in EMs. MethodsTranscriptomic datasets related to endometriosis were retrieved from the GEO databases (GSE7305, GSE7307, and GSE11691). Differential gene expression analysis was performed to identify pyroptosis-related differentially expressed genes (PRDEGs) by intersecting DEGs with a curated list of PRGs. Various bioinformatics tools were employed to explore the biological functions and pathways associated with PRDEGs. ResultsWe identified 26 PRDEGs from combined datasets and constructed an EMs diagnostic model using LASSO regression based on pyroptosis scores. The model included 5 DEGs: KIF13B, BAG6, MYO5A, HEATR, and AK055981. Additionally, 21 Key Module Genes (KMGs) were identified, leading to the classification of 3 distinct EMs subtypes. These subtypes were analyzed for immune cell infiltration, revealing a complex immune landscape in EMs. ConclusionsThis study reveals pyroptosis crucial role in EMs and offers a novel diagnostic model based on pyroptosis-related genes. Modulating pyroptosis may provide a new therapeutic approach for managing EMs.
02 /Specification & Classification
Click any tag to browse matching papers- Citations
- 0
- Organism
- Assay
- Research Focus
- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Gene co-expression network reveals key hub genes associated with endometriosis using bulk RNA-seq
Nooshin Ghahramani, Ali Hashemi, … Elaheh Esmaeili Kordlar·bioRxiv·Aug 10, 2025
- Metabolomic signatures support the diagnostics of peritoneal endometriosis using generalised linear models.
Alexander Cecil, Katja Vouk, … Tea Lanišnik Rižner·bioRxiv·Jul 7, 2026
- Characterizing the extracellular matrix transcriptome of endometriosis
Carson J. Cook, Noah Wiggin, Kaitlin C. Fogg·Reproductive SciencesPeer-reviewed·Oct 3, 2023
- PARP-1, EpCAM, and FRα as potential targets for intraoperative detection and delineation of endometriosis: a quantitative tissue expression analysis
B. Belmonte, G. Di Lorenzo, … S. Biffi·bioRxiv·Dec 19, 2023
- A cellular and molecular portrait of endometriosis subtypes
Marcos A. Fonseca, Kelly Nicole Wright, … Kate Lawrenson·bioRxiv·May 20, 2021
- Screening and identification of key biomarkers associated with endometriosis using bioinformatics and next generation sequencing data analysis
Basavaraj Mallikarjunayya Vastrad, Chanabasayya Mallikarjunayya Vastrad·Egyptian Journal of Medical Human GeneticsPeer-reviewed·Oct 12, 2024