bioRxivBioengineeringPreprint
Advancements in Developing an Automated Breast Density Detection Technique for Breast Cancer Risk Prediction: Synthesizing a Signal-dependent Noise Stochastic Process
John HeineiD, Erin E. E. FowleriD, Matthew B. SchabathiD, Kathleen M. EganiD
Abstract
Breast density is an important breast cancer risk factor estimated from mammograms and useful for breast cancer risk prediction. We describe a new formulation built on the backbone of an established automated percentage of breast density detection method. This framework relies on signal-dependent noise (SDN), characterized by a statistical dependence between the variance and mean signal. Variations in this dependency due to different image data representations cause degradation in the algorithms performance; the current work addresses this problem by synthesizing a stochastic process conditioned on a given mammogram instead of analyzing the mammogram directly. Image data used in the analysis was derived from three breast cancer case-control studies employing different mammographic technologies including full field digital mammography (both raw and clinical images) and digital breast tomosynthesis. The new formulation produced significant odds ratios across all image data representations due to these methodological advancements: (1) synthesis of SDN to an optimal quadratic structure given an arbitrary image; and (2) ensemble averaging over a given image, boosting the signal. We also demonstrate methods to standardize and combine measurements from different technologies using a probability density transformation technique. This automated technique can be applied to images from different technologies with minimal adjustment, thereby making it suitable for both research and clinical applications.
- Citations
- 1
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Breast Density Analysis Using Digital Breast Tomosynthesis
J. Heine, E. E. E. Fowler, … E. Hume·bioRxiv·Feb 10, 2023
- Candidate SNP analyses integrated with mRNA expression and hormone levels reveal influence on mammographic density and breast cancer risk
Margarethe Biong, Matthew J Suderman, … V Nedelcheva Kristensen·bioRxiv·Feb 2, 2018
- Deep Learning Identification of Stiffness Markers in Breast Cancer
A. Sneider, J. H. Kim, … D. Wirtz·bioRxiv·Dec 17, 2020
- Spatial Correlation and Breast Cancer Risk
E. E. Fowler, C. Hathaway, … J. Heine·bioRxiv·Feb 21, 2019
- An Introductory Implementation of Breast Cancer Detection from Mammograms and Pixel Intensity with Efficient-Net Other Neural Nets
Sheekar Banerjee, Humayun Kabir·bioRxiv·May 4, 2024
- Multi- Stage Feature Selection (MSFS) Algorithm for UWB- Based Early Breast Cancer Size Prediction
V. Vijayasarveswari, Allan Melvin Andrew, … Hasliza A. Rahim·PLoS ONEPeer-reviewed·Aug 13, 2020