Beyond Drift Diffusion Models: Fitting a broad class of decision and RL models with HDDM
Alexander FengleriD, Krishn BeraiD, Mads L. PederseniD, Michael J. FrankiD
Abstract
Computational modeling has become a central aspect of research in the cognitive neurosciences. As the field matures, it is increasingly important to move beyond standard models to quantitatively assess models with richer dynamics that may better reflect underlying cognitive and neural processes. For example, sequential sampling models (SSMs) are a general class of models of decision making intended to capture processes jointly giving rise to reaction time distributions and choice data in n-alternative choice paradigms. A number of model variations are of theoretical interest, but empirical data analysis has historically been tied to a small subset for which likelihood functions are analytically tractable. Advances in methods designed for likelihood-free inference have recently made it computationally feasible to consider a much larger spectrum of sequential sampling models. In addition, recent work has motivated the combination of SSMs with reinforcement learning (RL) models, which had historically been considered in separate literatures. Here we provide a significant addition to the widely used HDDM Python toolbox and include a tutorial for how users can easily fit and assess a (user extensible) wide variety of SSMs, and how they can be combined with RL models. The extension comes batteries included, including model visualization tools, posterior predictive checks, and ability to link trial-wise neural signals with model parameters via hierarchical Bayesian regression.
02 /Specification & Classification
Click any tag to browse matching papers- Citations
- 4
- Research Focus
- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Fitting drift-diffusion decision models to trial-by-trial data
Q. Feltgen, J. Daunizeau·bioRxiv·Jan 30, 2020
- HSSM: A Widely Applicable Toolbox for Hierarchical Bayesian Neuro-cognitive Modeling
Alexander Fengler, Yang Xu, … Michael J. Frank·bioRxiv·Jun 9, 2026
- A flexible framework for simulating and fitting generalized drift-diffusion models
Maxwell Shinn, Norman H. Lam, John D. Murray·eLifePeer-reviewed·Aug 4, 2020
- Recurrent Auto-Encoding Drift Diffusion Model
Moens Vincent, Alexandre Zénon·bioRxiv·May 14, 2018
- Accounting for endogenous effects in decision-making with a non-linear diffusion decision model
Isabelle Hoxha, Sylvain Chevallier, … Michel‐Ange Amorim·Scientific ReportsPeer-reviewed·Apr 18, 2023
- A Reinforcement Learning and Sequential Sampling Model Constrained by Gaze Data
William M. Hayes, Melanie Touchard·PLoS Computational BiologyPeer-reviewed·Mar 6, 2026