henhao
Sign in
Systems BiologyJournal of Mathematical Chemistry
Peer-reviewed journal article

Structural characterization of stochastic detailed balance in chemical reaction networks

Shangbin Ma, Youming LiiD

PDFDOIPreprint

Abstract

The global potential of a chemical reaction network has many applications and is closely related to the stochastic detailed balance. However, many fundamental questions concerning stochastic detailed balance remain unresolved, such as whether it depends on the system volume and how to construct new systems that satisfy it. In this paper, we show that stochastic detailed balance may depend on the system volume. We therefore introduce four types of stochastic detailed balance according to their dependence on volume and rate constants, and systematically investigate the relationships among them. Our results distinguish detailed balance arising from particular choices of volume and parameters from that enforced by network structure, and identify conditions under which detailed balance at one volume extends to all volumes. We further obtain a class of networks satisfying stochastic detailed balance for every volume and every positive choice of rate constants, and construct new systems whose global potentials exhibit double-well structures.

02 /Specification & Classification

Click any tag to browse matching papers
Citations
0
FWCI
0.00
Field percentile
top 19%

Reproducibility ledger

Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.

Sign in to file a reproducibility report.