bioRxivPhysiology
Gene co-expression patterns in Atlantic salmon adipose tissue provide a molecular link between seasonal changes, energy balance and age at maturity
E. P. Ahi, J.-P. Verta, J. Kurko, A. Ruokolainen, P. Singh, P. V. Debes, J. Erkinaro, C. R. Primmer
Abstract
Sexual maturation in many fishes requires a major physiological change that involves a rapid transition between energy storage and usage. In Atlantic salmon, this transition for the initiation of maturation is tightly controlled by seasonality and requires a high-energy status. Lipid metabolism is at the heart of this transition since lipids are the main energy storing molecules. The balance between lipogenesis (lipid accumulation) and lipolysis (lipid use) determines energy status transitions. A genomic region containing a transcription co-factor of the Hippo pathway, vgll3, is the main determinant of maturation timing in Atlantic salmon. Interestingly, vgll3 acts as an inhibitor of adipogenesis in mice and its genotypes are potentially associated with seasonal heterochrony in lipid storage and usage in juvenile Atlantic salmon. Here, we explored changes in expression of more than 300 genes directly involved in the processes of adipogenesis, lipogenesis and lipolysis, as well as the Hippo pathway in the adipose tissue of immature and mature Atlantic salmon with distinct vgll3 genotypes. We found molecular evidence consistent with a scenario in which immature males exhibiting vgll3 genotype specific seasonal direction of change in their lipid profiles. We also identified components of the Hippo signaling pathway as potential major drivers of vgll3 genotype specific differences in adipose tissue gene expression. This study demonstrates the importance of adipose gene expression patterns for directly linking environmental changes with energy balance and age at maturity through genetic factors bridging lipid metabolism, seasonality and sexual maturation.
- organism: non-human primate
- assay: bulk RNA-seq
- research focus: cell type annotation
- research focus: differential expression
- research focus: gene regulatory network inference
- approach: statistical model
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Hippo-vgll3 signaling may contribute to sex differences in Atlantic salmon maturation age via contrasting adipose dynamics
Ehsan Pashay Ahi, Jukka‐Pekka Verta, … Craig Robert Primmer·bioRxiv·Oct 21, 2024
- Seasonal and genetic effects on lipid profiles of juvenile Atlantic salmon
A. House, P. Debes, … C. R. Primmer·bioRxiv·Feb 22, 2023
- Genotype-specific variation in seasonal body condition at a large-effect maturation locus
A. H. House, P. V. Debes, … C. R. Primmer·bioRxiv·Jan 15, 2023
- Sex-, development-, and nutrition-dependent expression of a major age-at-maturity gene in Atlantic salmon
Eirik R. Åsheim, Paul V. Debes, … Craig Robert Primmer·bioRxiv·Sep 15, 2024
- A salmon fish model reveals genetic signals in brain associated with early maturation
Ehsan Pashay Ahi, Jukka‐Pekka Verta, … Craig Robert Primmer·bioRxiv·Mar 18, 2024
- Testicular gene expression patterns suggest a heterochronic shift underlying vgll3-mediated maturation age variation in Atlantic salmon
Ehsan Pashay Ahi, Jukka‐Pekka Verta, … Craig Robert Primmer·bioRxiv·Mar 5, 2025