Author

J.-P. Verta

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Evolutionary Biology· 4 Genomics· 1 Physiology· 1

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Assay:bulk RNA-seq· 5 Research Focus:gene regulatory network inference· 4 Research Focus:cell type annotation· 3 Research Focus:differential expression· 3 Approach:experimental assay· 3 Approach:statistical model· 3 Organism:human· 2 Organism:non-human primate· 2

Frequent Co-Authors

C. R. Primmer· 4 shared A. Ruokolainen· 3 shared J. Erkinaro· 3 shared P. V. Debes· 3 shared C.R. Landry· 1 shared D. Ojeda· 1 shared E. P. Ahi· 1 shared H. Barton· 1 shared

Activity by Year

2014-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 19 mutual co-author links

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4 shared papersEvolutionary Biology

C. R. Primmer

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Author profile →

6 papers

Recent·Most cited

A complex mechanism translating variation of a simple genetic architecture into alternative life-histories

J.-P. Verta, J. Moustakas-Verho, I. Donner, M. Frapin, A. Ruokolainen, P. V. Debes, J. Erkinaro, C. R. Primmer

The paper shows that variation in the vgll3 gene affects multiple molecular pathways in Atlantic salmon, leading to different life-history strategies through complex gene interactions.

bioRxiv · Jan 5, 2024Evolutionary Biology

Gene co-expression patterns in Atlantic salmon adipose tissue provide a molecular link between seasonal changes, energy balance and age at maturity

E. P. Ahi, J.-P. Verta, J. Kurko, A. Ruokolainen, P. Singh, P. V. Debes, J. Erkinaro, C. R. Primmer

The paper identifies gene co-expression patterns in Atlantic salmon adipose tissue linking seasonal changes, energy balance, and age at maturity through vgll3 genotype effects.

bioRxiv · Aug 30, 2023Physiology

Genetic drift dominates genome-wide regulatory evolution following an ancient whole genome duplication in Atlantic salmon

J.-P. Verta, H. Barton, V. Pritchard, C. R. Primmer

bioRxiv · Nov 20, 2020Evolutionary Biology

Cis-regulatory differences in isoform expression associate with life history strategy variation in Atlantic salmon

J.-P. Verta, P. V. Debes, N. Piavchenko, A. Ruokolainen, O. Ovaskainen, J. E. Moustakas-Verho, S. Tillanen, N. Parre, T. Aykanat, J. Erkinaro, C. R. Primmer

This study identifies cis-regulatory differences in vgll3 isoform expression linked to age at maturity variation in Atlantic salmon.

bioRxiv · Jul 14, 2020 · PreprintEvolutionary Biology

Utilization of tissue ploidy level variation in de novo transcriptome assembly of Pinus sylvestris

D. Ojeda, T. Mattila, T. Ruttink, S. Kujala, K. Karkkainen, J.-P. Verta, T. Pyhajarvi

This study evaluates the impact of using haploid tissue in de novo transcriptome assembly of Pinus sylvestris to reduce allelic redundancy and improve transcriptome quality.

bioRxiv · Dec 13, 2018Evolutionary Biology

THE GENETIC LANDSCAPE OF TRANSCRIPTIONAL NETWORKS IN A COMBINED HAPLOID/DIPLOID PLANT SYSTEM

J.-P. Verta, C.R. Landry, J. MacKay

The paper analyzes the genetic basis of transcriptional variation in a haploid/diploid plant system, identifying cis and trans effects and their phenotypic additivity.

bioRxiv · Jul 15, 2014 · PreprintGenomics