bioRxivNeurosciencePreprint
Robust Detection of Brain Stimulation Artifacts in iEEG Using Autoencoder-Generated Signals and ResNet Classification
Jeremy SaaliD, Ankit N. KhambhatiiD, Edward F. ChangiD, Prasad R. ShirvalkariD
Abstract
BackgroundIntracranial EEG (iEEG) is crucial for understanding brain function, but stimulation-induced noise complicates data interpretation. Traditional artifact detection methods require manual user input or struggle with noise variability, especially with limited labeled data. ObjectiveWe developed a supervised method to automatically detect stimulation-induced noise in human iEEG recordings using synthetic data generated by Variational Autoencoders (VAEs) to train a ResNet-18 classifier. MethodsMulti-lead iEEG data were collected, preprocessed, and used to train VAEs for generating synthetic clean and noisy signals. The ResNet-18 model was trained on images of spectra generated from these synthetic signals and validated on real iEEG data from five participants. ResultsThe classifier, trained exclusively on synthetic data, demonstrated high accuracy, precision, and recall when applied to real iEEG recordings, with AUC values greater than 0.99 across all participants. ConclusionWe present a novel approach to effectively detect stimulation-induced noise in iEEG, offering a robust solution for improving data interpretation in scenarios with limited labeled data. Additionally, the pre-trained ResNet-18 model is available for the community to use, facilitating further research and application in similar datasets.
- organism: human
- assay: electronic health records
- research focus: differential expression
- research focus: benchmarking
- approach: deep learning
- approach: statistical model
- Citations
- 2
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