Sign in
BiophysicsbioRxiv
Preprint

Using deep-learning to obtain calibrated individual disease and ADL damage transition probabilities between successive ELSA waves

E. Dil, A. Rutenberg

Abstract

We predictively model damage transition probabilities for binary health outputs of 19 diseases and 25 activities of daily living states (ADLs) between successive waves of the English Longitudinal Study of Aging (ELSA). Model selection between deep neural networks (DNN), random forests, and logistic regression found that a simple one-hidden layer 128-node DNN was best able to predict future health states (AUC [≥] 0.91) and average damage probabilities (R2 [≥] 0.92). Feature selection from 134 explanatory variables found that 33 variables are sufficient to predict all disease and ADL states well. Deciles of predicted damage transition probabilities were well calibrated, but correlations between predicted health states were stronger than observed. The hazard ratios (HRs) between high-risk deciles and the average were between 3 and 10; high prevalence damage transitions typically had smaller HRs. Model predictions were good across all individual ages. A simple one-hidden layer DNN predicts multiple binary diseases and ADLs with well calibrated damage and repair transition probabilities.

02 /Specification & Classification

Click any tag to browse matching papers

Reproducibility ledger

Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.

Sign in to file a reproducibility report.

Similarity Map
SelectedSame fieldCross-field
THISPark '20Olaimat '23Nori '19Hassanzadeh '17Tan '25Pyrkov '18
59% semantic matchBioinformatics
Ji Hwan Park, Han Eol Cho, Jong Hun Kim+6 more·npj Digital Medicine·Mar 26, 2020· 148 citations