IEEE Transactions on Neural Systems and Rehabilitation EngineeringNeurosciencePeer-reviewed journal article
ScoreNet: A Neural network-based post-processing model for identifying epileptic seizure onset and offset in EEGs
Poomipat BoonyakitanontiD, Apiwat Lek-uthaiiD, Jitkomut SongsiriiD
- Citations
- 20
- FWCI
- 1.71
- Field percentile
- top 17%
Abstract
We design an algorithm to automatically detect epileptic seizure onsets and offsets from scalp EEGs. The proposed scheme consists of two sequential steps: detecting seizure episodes from long EEG recordings, and determining seizure onsets and offsets of the detected episodes. We introduce a neural network-based model called ScoreNet to carry out the second step by better predicting the seizure probability of pre-detected seizure epochs to determine seizure onsets and offsets. A cost function called log-dice loss with a similar meaning to the F1 score is proposed to handle the natural data imbalance inherent in EEG signals signifying seizure events. ScoreNet is then verified on the CHB-MIT Scalp EEG database in combination with several classifiers including random forest, CNN, and logistic regression. As a result, ScoreNet improves seizure detection performance over lone epoch-based seizure classification methods; F1 scores increase significantly from 16-37% to 53-70%, and false positive rates per hour decrease from 0.53-5.24 to 0.05-0.61. This method provides clinically acceptable latencies of detecting seizure onset and offset of less than 10 seconds. In addition, an effective latency index is proposed as a metric for detection latency whose scoring considers undetected events to provide better insight into onset and offset detection than conventional time-based metrics.
- assay: electronic health records
- research focus: differential expression
- approach: deep learning
- approach: statistical model
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