The Plant JournalPlant BiologyPeer-reviewed journal article
Contrasting Rhizosphere Nitrogen Dynamics in Andropogoneae Grasses: Implications for Sustainable Agriculture
Sheng‐Kai HsuiD, Bryan D. EmmettiD, Alexandria Jade HaafkeiD, Germano Costa‐NetoiD, Aimee J SchulziD, Nicholas K. LepakiD, Thuy LaiD, Taylor AuBuchon‐ElderiD, Charles O. HaleiD, Sierra S. RagliniD, Jonathan Odilón Ojeda‐RiveraiD, Angela D. KentiD, Elizabeth Anne KelloggiD, M. Cinta RomayiD, Edward S. BuckleriD
Abstract
Background: Nitrogen (N) fertilization in crop production significantly impacts ecosystems, often disrupting natural plant-microbe-soil interactions and causing environmental pollution. Our research tested the hypothesis that phylogenetically related perennial grasses might preserve rhizosphere management strategies conducive to a sustainable N economy for crops. Method: We analyzed the N cycle in the rhizospheres of 36 Andropogoneae grass species related to maize and sorghum, investigating their impacts on N availability and losses. This assay is supplemented with the collection and comparison of native habitat environment data for ecological inference as well as cross-species genomic and transcriptomic association analyses for candidate gene discovery. Result: Contrary to our hypothesis, all examined annual species, including sorghum and maize, functioned as N "Conservationists," reducing soil nitrification potential and conserving N. In contrast, some perennial species enhanced nitrification and leaching ("Leachers"). Yet a few other species exhibited similar nitrification stimulation effects but limited NO3- losses ("Nitrate Keepers"). We identified significant soil characteristics as influential factors in the eco- evolutionary dynamics of plant rhizospheres, and highlighted the crucial roles of a few transporter genes in soil N management and utilization. Conclusion: These findings serve as valuable guidelines for future breeding efforts for global sustainability.
- organism: plant (other)
- assay: metagenomics
- assay: proteomics
- research focus: cell type annotation
- research focus: gene regulatory network inference
- approach: statistical model
- approach: genetic perturbation / CRISPR
- Citations
- 3
- FWCI
- 1.18
- Field percentile
- top 23%
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- In Silico Evaluation of Plant Nitrification Suppression Effects on Agroecosystem Nitrogen Loss
M. D. Hartman, M. B. Burnham, … W. H. Yang·EcospherePeer-reviewed·Dec 4, 2022
- Rhizosphere Microbiomes in a Historical Maize/Soybean Rotation System respond to Host Species and Nitrogen Fertilization at Genus and Sub-genus Levels
M. A. Meier, M. G. Lopez-Guerrero, … J. Yang·bioRxiv·Aug 10, 2020
- Genetic variation exists within Zea mays to influence unsustainable nitrogen cycling microbiome function
A. Favela, M. O. Bohn, A. D. Kent·bioRxiv·Sep 19, 2023
- Distinct mechanisms drive plant-nitrifier interactions in topsoil and subsoil
D. Liang, N. Ji, … W. H. Yang·bioRxiv·Dec 1, 2023
- A transcriptomic atlas of grass senescence reveals divergent underground sink networks limit nitrogen recycling in annuals
Jonathan Odilón Ojeda‐Rivera, Elad Oren, … M. Cinta Romay·bioRxiv·May 6, 2026
- Mucilage Produced by Sorghum 1 (Sorghum bicolor) Aerial Roots Hosts Diazotrophs that Provide Significant Amounts of Nitrogen to the Plant
R. E. Venado, J. Wilker, … J.-M. Ane·bioRxiv·Aug 5, 2023