bioRxivPlant BiologyPreprint
Modelling symplasmic transport: from biophysical basics to steeper root gradients
Eva E. DeinumiD, Athanasius F. M. MaréeiD, Yoselin Benitez‐AlfonsoiD, Verônica Albers GrieneiseniD
Abstract
Development and spatial pattern formation are inherently linked. The coordinated determination of cell fates is crucial in any developmental process and requires extensive intercellular communication. Plants cells exchange many molecular signals via the symplasmic pathway, i.e., via plasmodesmata: narrow channels connecting the cytoplasm of neighbouring cells. Regulation of symplasmic transport is vital for normal plant development, and mutations that disrupt this regulation are often embryo or seedling lethal. In many tissues, symplasmic transport of small molecules is diffusion driven, resulting in a non-selective and bidirectional transport, although net directionality could arise from gradients. This has led to the (dogmatic) belief that symplasmic transport can only be detrimental to pattern formation, because signalling molecules cannot be confined, and gradients would fade. Here, we develop a detailed biophysical description of symplasmic transport to explore how plasmodesmata affect gradients in a linear tissue. We then apply the model in more complex tissue contexts, observing and explaining, e.g., that symplasmic transport may result in steeper gradients in the root apical meristem. In conclusion, our model provides a reference framework for estimating the consequences of symplasmic transport and explains how symplasmic transport can contribute to more robust developmental patterning.
- Citations
- 2
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Directional Cell-to-cell Transport in Plant Roots
Léa Jacquier, Celeste Aurora Fiorenza, … Marie Barberon·Molecular PlantPeer-reviewed·Jul 17, 2025
- From plasmodesma geometry to effective symplasmic permeability through biophysical modelling
E. E. Deinum, Y. Benitez Alfonso, B. Mulder·bioRxiv·Nov 15, 2019
- Electric charge controls plasmodesma conductivity
Alexander H Howell, Vincent James, … Michael Knoblauch·Proceedings of the National Academy of SciencesPeer-reviewed·Apr 6, 2026
- Exploring The Formation And Permeability Of Plasmodesmata In The Liverwort, Marchantia polymorpha
Chia‐Yun Hsu, Chia‐Hsuan Hsu, … Kuan‐Ju Lu·Plant and Cell PhysiologyPeer-reviewed·Dec 29, 2024
- Diversity of funnel plasmodesmata in angiosperms: the impact of geometry on plasmodesmal resistance
G. P. Ostermeyer, K. H. Jensen, … M. Knoblauch·bioRxiv·May 5, 2021
- Regulation of intercellular TARGET OF MONOPTEROS 7 protein transport in the Arabidopsis root
K.-J. Lu, B. De Rybel, … D. Weijers·bioRxiv·Mar 31, 2017