bioRxivCancer BiologyPreprint
Antibody-Protein L Functionalized Microparticles for Detection of Surface Markers in Heterogeneous Colorectal Lesions
Saleh M. RamezaniiD, Niki Marie ZachariasiD, William Norton, Jennifer Sarah DavisiD, Abishai Dominic, Ryan ArmijoiD, Muxin WangiD, Richard E. WendtiD, Daniel D. Carson, Daniel A. HarringtoniD, Mary C. Farach‐CarsoniD, Pratip K. BhattacharyaiD
Abstract
Visualization of colorectal cancer (CRC) lesions is complicated by their location in the colon and tumor morphology. Reliance on a single surface biomarker for direct identification risks false negatives due to temporal changes and/or tumor heterogeneity. We developed a multiplexed system of complementary biomarker targets in an effort to capture a broader range of lesions with diverse temporal and/or phenotypic expression. We identified Mucin-1 (MUC1) and epithelial cell adhesion molecule (EPCAM) as useful targeting pairs by examining multiple colon tumor subtypes in a standard tissue array, and by surveying multiple CRC cell lines, both as 2D cultures and as 3D tumoroids, for the presence of the CRC surface biomarkers. We demonstrated the utility of a "universal" surface functionalization approach using Antibody-Protein L functionalized microparticles (APL-MPs) that enabled the simultaneous incorporation of antibodies recognizing MUC1 and EPCAM. Using CRC cell heterogeneous tumoroids expressing both MUC1 and EPCAM (HET-tumoroids) and orthotopic animal cancer models designed to express both surface antigens, we demonstrated that: 1) APL-MPs identified MUC1- and EPCAM-positive tumoroids in proportion to antigen expression; 2) APL-MPs detected CRC surface antigens on the luminal colon surface in vivo, and 3) concurrent targeting of multiple surface antigens enhanced the sensitivity of detection of heterogeneous CRC lesions. This approach opens the door for the use of antibody-protein L dual-targeting MPs in a variety of applications to detect heterogeneous cancer lesions. SignificanceMulti-antigen targeting of MUC1 and EPCAM with Antibody-Protein L microparticles enhances the detection sensitivity of heterogeneous colorectal cancer lesions, offering a promising strategy for the accurate visualization of tumors in complex environments.
- organism: mouse
- assay: proteomics
- research focus: cell type annotation
- research focus: differential expression
- research focus: cell-cell communication
- approach: experimental assay
- Citations
- 0
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Proteomics study of colorectal cancer and adenomatous polyps identifies TFR1, SAHH, and HV307 as potential biomarkers for screening
- Targeted Molecular MRI of Colorectal Cancer by Antibody Functionalized Hyperpolarized Silicon Particles
Nicholas Whiting, Jingzhe Hu, … Pratip K. Bhattacharya·bioRxiv·May 6, 2025
- Systemic antibody repertoires target specific microbial antigens in patients with colorectal cancer
Gabriel Innocenti, Stefanie Brezina, … Thomas J. Vogl·bioRxiv·Oct 19, 2026
- CMS4-focused multi-omic integration enhances antigen target identification in colorectal cancer
Eleonore Fox, Léa Meunier, … Camille Marijon·bioRxiv·May 7, 2026
- Proteomics-Enhanced AI-Digital Pathology in Metastatic Mucinous Colorectal Carcinoma: A Case Report
Lívia Fülöp, Balazs Szigeti, … György Marko‐Varga·bioRxiv·Mar 4, 2026
- A bispecific antibody-drug conjugate targeting pCAD and CDH17 has antitumor activity and improved tumor specificity
Alyssa Synan, Nila C. Wu, … Joseph A. D’Alessio·bioRxiv·Apr 19, 2024