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bioRxivNeurosciencePreprint

BRAPH 2: a flexible, open-source, reproducible, community-oriented, easy-to-use framework for network analyses in neurosciences

Yu-Wei ChangiD, Blanca Zufiria GerbolésiD, Emiliano Gómez-Ruiz, Anna Canal-GarcíaiD, Hang Zhao, Mite MijalkoviD, Joana B. PereiraiD, Giovanni VolpeiD

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Abstract

As network analyses in neuroscience continue to grow in both complexity and size, flexible methods are urgently needed to provide unbiased, reproducible insights into brain function. BRAPH 2 is a versatile, open-source framework that meets this challenge by offering streamlined workflows for advanced statistical models and deep learning in a community-oriented environment. Through its Genesis compiler, users can build specialized distributions with custom pipelines, ensuring flexibility and scalability across diverse research domains. These powerful capabilities will ensure reproducibility and accelerate discoveries in neuroscience.

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