Journal of HeredityGenomicsPeer-reviewed journal article
Embracing the power of genomics to inform evolutionary significant units
Jayna C. BergmaniD, Rebecca S. TayloriD, Micheline ManseauiD
Abstract
Appropriate identification of evolutionary significant units (ESUs) is essential for effective conservation planning. Genomic data has emerged as a key tool to inform ESU decisions due to the increased information resolution, yet it remains unclear how genomic data are being used in practice to identify the number of ESUs. To address this, we conducted a systematic literature review and found that genomic data are increasingly being used to suggest numbers of ESUs globally across plant and animal taxa. However, our review revealed inconsistencies in how ESUs are defined, with many studies not providing a definition at all. We also found inconsistencies in the methods used to analyze genomic data, highlighting the need for greater standardization to ensure studies adequately address all components of an ESUs. Adaptive loci, a key advantage of genomic data, need to be interpreted with caution and simply identifying these loci may lead to inflated ESU estimates. Overall, we found that 68% of studies suggested an increase in the number of ESUs, and that the amount of gene flow detected did not appear to influence this conclusion. We outline how genomic data can be used to assess the two key components of ESUs and provide recommendations for future studies aiming to identify ESUs with genomic data.
- Citations
- 1
- FWCI
- 1.10
- Field percentile
- top 30%
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Genomic characterization and curation of UCEs improves species tree reconstruction.
M. H. Van Dam, J. B. Henderson, … M. Trautwein·bioRxiv·Nov 1, 2019
- The power to resolve relationships: identifying incongruence and precision of reduced representation and genome-wide data in phylogenomics and population genomics
Joshua M. Felton, Chloe Jelley, … Jacob B. Landis·bioRxiv·Jul 9, 2025
- Evaluating UCE data adequacy and integrating uncertainty in a comprehensive phylogeny of ants
Marek L. Borowiec, Yuanmeng Miles Zhang, … Corrie Saux Moreau·Systematic BiologyPeer-reviewed·Jan 6, 2025
- SPrUCE: Utilizing Ultraconserved Elements of DNA for Population-Level Genetic Diversity Estimation
Daira Melendez, Ali Osman Berk Şapcı, … Siavash Mirarab·Molecular Ecology ResourcesPeer-reviewed·Apr 1, 2026
- Estimation of contemporary effective population size in plant populations: limitations of genomic datasets
R. Gargiulo, V. Decroocq, … M. Heuertz·bioRxiv·Jul 18, 2023
- Genomic erosion in the assessment of species extinction risk and recovery potential
Cock van Oosterhout, Samuel A. Speak, … Hernán E. Morales·Journal of HeredityPeer-reviewed·Jan 31, 2026