Cell GenomicsGenetic & Genomic MedicinePeer-reviewed journal article
Leveraging global multi-ancestry meta-analysis in the study of Idiopathic Pulmonary Fibrosis genetics
Juulia PartaneniD, Paavo HäppöläiD, Wei ZhouiD, Arto LehistöiD, Mari AinolaiD, Eva SutineniD, Richard J. AlleniD, Amy Stockwell, Olivia C. LeavyiD, Justin M. OldhamiD, Beatriz Guillén‐GuíoiD, Nancy Jean CoxiD, Jibril B HirboiD, David A. SchwartziD, Tasha E. FingerliniD, Carlos FloresiD, Imre NothiD, Brian L. YaspaniD, Gisli R. JenkinsiD, Louise V. WainiD, Samuli RipattiiD, Matti PirineniD, Tarja LaitineniD, Riitta L. KaarteenahoiD, Marjukka Myllärniemi, , Jukka T. KoskelaiD
- Citations
- 61
- FWCI
- 8.70
- Field percentile
- top 1%
Abstract
The research of rare and devastating orphan diseases such as Idiopathic Pulmonary Fibrosis (IPF) has been limited by the rarity of the disease itself. The prognosis is poor - the prevalence of IPF is only [~]4-times the incidence of the condition, limiting the recruitment of patients to trials and studies of the underlying biology of the disease. However, global biobanking efforts can dramatically alter the future of IPF research. Here we describe the largest meta-analysis of IPF, with 8,492 patients and 1,355,819 population controls from 13 biobanks around the globe. Finally, we combine the meta-analysis with the largest available meta-analysis of IPF so far, reaching 11,160 patients and 1,364,410 population controls in analysis. We identify seven novel genome-wide significant loci, only one of which would have been identified if the analysis had been limited to European ancestry individuals. We observe notable pleiotropy across IPF susceptibility and severe COVID-19 infection, beyond what is known to date. We also note a significant unexplained sex-heterogeneity effect at the strongest IPF locus MUC5B.
- organism: human
- assay: GWAS summary statistics
- research focus: GWAS / association mapping
- approach: statistical model
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Cross-ancestry evaluation of idiopathic pulmonary fibrosis genetic risk variants
Ritah Nabunje, Beatriz Guillén‐Guío, … Richard J. Allen·medRxiv·Apr 25, 2026
- Genome-wide association study across five cohorts identifies five novel loci associated with idiopathic pulmonary fibrosis
Richard J. Allen, Amy Stockwell, … Louise V. Wain·ThoraxPeer-reviewed·Jun 10, 2022
- Genetic landscape of idiopathic pulmonary fibrosis: A systematic review, meta-analysis and epidemiological evidence of case-control studies
Pooja Singh, Debleena Guin, … Ritushree Kukreti·medRxiv·May 18, 2023
- Genome-wide association study of Idiopathic Pulmonary Fibrosis susceptibility using clinically-curated European-ancestry datasets
Daniel Chin, Tamara Hernández-Beeftink, … Louise V. Wain·European Respiratory JournalPeer-reviewed·May 21, 2026
- Integrative Analyses Reveal Novel Disease-associated Loci and Genes for Idiopathic Pulmonary Fibrosis
Ming Chen, Yiliang Zhang, … Hongyu Zhao·ThoraxPeer-reviewed·Oct 10, 2022
- Shared genetic etiology between idiopathic pulmonary fibrosis and COVID-19 severity
João Fadista, Luke M. Kraven, … Bjarke Feenstra·EBioMedicinePeer-reviewed·Mar 1, 2021