bioRxivNeurosciencePreprint
REMI: Reconstructing Episodic Memory During Internally Driven Path Planning
Zhaoze Wang, Genela MorrisiD, Dori DerdikmaniD, Pratik ChaudhariiD, Vijay BalasubramanianiD
Abstract
Grid cells in the medial entorhinal cortex (MEC) and place cells in the hippocampus (HC) both form spatial representations. Grid cells fire in triangular grid patterns, while place cells fire at specific locations and respond to contextual cues. How do these interacting systems support not only spatial encoding but also internally driven path planning, such as navigating to locations recalled from cues? Here, we propose a system-level theory of MEC-HC wiring that explains how grid and place cell patterns could be connected to enable cue-triggered goal retrieval, path planning, and reconstruction of sensory experience along planned routes. We suggest that place cells autoassociate sensory inputs with grid cell patterns, allowing sensory cues to trigger recall of goal-location grid patterns. We show analytically that grid-based planning permits shortcuts through unvisited locations and generalizes local transitions to long-range paths. During planning, intermediate grid states trigger place cell pattern completion, reconstructing sensory experiences along the route. Using a single-layer RNN modeling the HC-MEC loop with a planning subnetwork, we demonstrate these effects in both biologically grounded navigation simulations using RatatouGym and visually realistic navigation tasks using Habitat Sim. Codes for experiments, simulations, and vision encoder are available at 1,2,3.
- organism: rat
- assay: spatial transcriptomics
- research focus: trajectory inference
- research focus: cell-cell communication
- research focus: benchmarking
- research focus: software / tool
- approach: deep learning
- approach: statistical model
- Citations
- 3
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