bioRxivEcology
Phylogenetically conservative trait correlation: quantification and interpretation
Abstract
O_LICorrelation across species between two quantitative traits, or between a trait and a habitat property, can suggest that a trait value is effective in sustaining populations in some contexts but not others. It is widely held that such correlations should be controlled for phylogeny, via phylogenetically independent contrasts PICs or phylogenetic generalised least squares PGLS. C_LIO_LITwo weaknesses of this idea are discussed. First, the phylogenetically conservative share of the correlation ought not to be excluded from consideration as potentially ecologically functional. Second, PGLS does not yield a complete or accurate breakdown of A-B covariation, because it corresponds to a generating model where B predicts variation in A but not the reverse. C_LIO_LIMulti-response mixed models using phylogenetic covariance matrices can quantify conservative trait correlation CTC, a share of covariation between traits A and B that is phylogenetically conservative. Because the evidence is from correlative data, it is not possible to split CTC into causation by phylogenetic history versus causation by continuing reciprocal selection between A and B. Moreover, it is quite likely biologically that the two influences have acted in concert, through phylogenetic niche conservatism. C_LIO_LISynthesis: The CTC concept treats phylogenetic conservatism as a conjoint interpretation alongside ongoing influence of other traits. CTC can be quantified via multi-response phylogenetic mixed models. C_LI
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- The comparative analysis of lineage-pair traits.
Sean A. S. Anderson, Sachin Kaushik, Daniel Ricardo Matute·Systematic BiologyPeer-reviewed·Sep 5, 2025
- Testing for correlation between traits under directional evolution
M. Royer-Carenzi, G. Didier·bioRxiv·Jun 11, 2019
- Unifying approaches from statistical genetics and phylogenetics for mapping phenotypes in structured populations
Joshua G. Schraiber, Michael D. Edge, Matt Pennell·PLoS BiologyPeer-reviewed·Oct 9, 2024
- Sizing up phylogenetic testing in geometric morphometrics: A case study of allometry
D. Rex Mitchell, Ben Halliwell, … Vera Weisbecker·Bijdragen tot de DierkundePeer-reviewed·Jul 6, 2026
- A simple hierarchical model for heterogeneity in the evolutionary correlation on a phylogenetic tree
L. J. Revell, K. S. Toyama, D. L. Mahler·bioRxiv·May 6, 2021
- Improving the Robustness of Phylogenetic Independent Contrasts: Addressing Abrupt Evolutionary Shifts with Outlier- and Distribution-Guided Correlation
Zhenglin Chen, Rui Huang, … Deng‐Ke Niu·Systematic BiologyPeer-reviewed·Mar 9, 2026