bioRxivPlant Biology
Cytokinin perception in potato: New features of canonic players
S. N. Lomin, Y. A. Myakushina, O. O. Kolachevskaya, I. A. Getman, D. V. Arkhipov, E. M. Savelieva, D. I. Osolodkin, G. A. Romanov
Abstract
Potato is the most economically important non-cereal food crop. Tuber formation in potato is regulated by phytohormones, cytokinins (CKs) in particular. The present work was aimed to study CK signal perception in potato. The sequenced potato genome of doubled monoploid Phureja was used for bioinformatic analysis and as a tool for identification of putative CK receptors from autotetraploid potato cv. Desiree. All basic elements of multistep phosphorelay (MSP) required for CK signal transduction were identified in Phureja genome, including three genes orthologous to three CK receptor genes (AHK 2-4) of Arabidopsis. As distinct from Phureja, autotetraploid potato contains at least two allelic isoforms of each receptor type. Putative receptor genes from Desiree plants were cloned, sequenced and expressed, and main characteristics of encoded proteins, firstly their consensus motifs, structure models, ligand-binding properties, and the ability to transmit CK signal, were determined. In all studied aspects the predicted sensor histidine kinases met the requirements for genuine CK receptors. Expression of potato CK receptors was found to be organ-specific and sensitive to growth conditions, particularly to sucrose content. Our results provide a solid basis for further in-depth study of CK signaling system and biotechnological improvement of potato.
- organism: plant (other)
- assay: DNA methylation
- assay: whole-genome sequencing
- research focus: cell type annotation
- research focus: gene regulatory network inference
- approach: biophysical modeling
- approach: experimental assay
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