bayesTPC: Bayesian inference for Thermal Performance Curves in R
Sean Sorek, John W. SmithiD, Paul J. HuxleyiD, Leah R. JohnsoniD
Abstract
1O_LIReliable predictions of arthropod responses to climatic warming are important because many of these species perform important roles that can directly impact human society. C_LIO_LIThermal performance curves (TPCs) provide useful information on the physiological constraints that limit the capacity of temperature-sensitive organisms (like arthropods) to exist and grow. C_LIO_LINLS pipelines for fitting TPCs are widely available, but these approaches rely on assumptions that can yield unreliable parameter estimates. C_LIO_LIWe present bayesTPC, an R package for fitting TPCs to trait responses using the nimble language and machinery as the underlying engine for Markov Chain Monte Carlo. bayesTPC aims to support the adoption of Bayesian approaches in thermal physiology, and promote TPC fitting that adequately quantifies uncertainty. C_LI
02 /Specification & Classification
Click any tag to browse matching papers- Citations
- 12
- FWCI
- 5.27
- Field percentile
- top 3%
- Research Focus
- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Best Practices for Modeling Arthropod Lifetimes in a Bayesian Framework
Piper O. Zimmerman, Leah R. Johnson·bioRxiv·Dec 19, 2025
- A flexible model for thermal performance curves
Mauricio Cruz‐Loya, Erin A. Mordecai, Van M. Savage·EcologyPeer-reviewed·Feb 1, 2026
- Modeling asymmetric Thermal Performance Curves for proportion data
Leah R. Johnson, Catherine A. Lippi, … Sadie J. Ryan·bioRxiv·Oct 17, 2025
- rTPC and nls.multstart: a new pipeline to fit thermal performance curves in R.
D. Padfield, H. O'Sullivan, S. Pawar·bioRxiv·Dec 16, 2020
- TPCdesign: A guide to designing informative thermal performance experiments
Kelsey P. Lyberger, Lucas A. Nell, Krijn A Paaijmans·bioRxiv·Sep 30, 2026
- A general model for the evolution of thermal performance curves with application to real time-series data
Jiseon Min, Zoe Chapman, … Katie E. Lotterhos·bioRxiv·Jun 20, 2026