bioRxivEcology
Individual tree-based vs pixel-based approaches to mapping forest functional traits and diversity by remote sensing
Z. Zheng, Y. Zeng, M. C. Schuman, H. Jiang, B. Schmid, M. Schaepman, F. Morsdorf
Abstract
Trait-based approaches, focusing on the functional characteristics of vascular plants in a community, have been increasingly used in plant ecology and biodiversity research. Compared with traditional field survey (which typically samples individual trees), remote sensing enables quantifying functional traits over large contiguous areas, but assigning trait values to biological units such as species and individuals is difficult with pixel-based approaches. We used a subtropical forest landscape in China to compare an approach based on LiDAR-delineated individual tree crowns (ITCs) with a pixel-based approach for assessing functional traits from remote sensing data. We compared trait distributions, trait-trait relationships and functional diversity metrics obtained by the two approaches at changing grain and extent. We found that morphological traits derived from airborne laser scanning showed more differences between ITC- and pixel-based approaches than physiological traits estimated by imaging spectroscopy data. Pixel sizes approximating average tree crowns yielded similar results as ITCs, but 95th quantile height and foliage height diversity tended to be overestimated and leaf area index underestimated relative to ITC-based values. With increasing pixel size, the differences to ITC- based trait values became larger and less trait variance was captured, indicating information loss. The consistency of ITC- and pixel-based functional richness measures also decreased with increasing pixel grain, and changed with the observed extent for functional diversity monitoring. We conclude that whereas ITC-based approaches in principle allow partitioning of variation between individuals, genotypes and species, at high resolution, pixel-based approaches come close to this and can be suitable for assessing ecosystem-scale trait variation by weighting individuals and species according to coverage.
- organism: plant (other)
- assay: imaging
- research focus: ecology & biodiversity
- research focus: spatial domain detection
- research focus: benchmarking
- approach: experimental assay
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Bridging the gaps between field-based ecology and remote sensing to estimate plant functional diversity: a systematic review
José Miguel Cerda, Javier Pacheco‐Labrador, … Javier Lopatin·bioRxiv·Feb 19, 2026
- Estimating individual level plant traits at scale
S. Marconi, S. Graves, … E. White·Ecological ApplicationsPeer-reviewed·Mar 28, 2021
- Benchmarking remote sensing methods to capture plant functional diversity from space
Javier Pacheco‐Labrador, Ulisse Gomarasca, … Grégory Duveiller·Ecological InformaticsPeer-reviewed·Jan 30, 2026
- Mapping canopy foliar functional traits in a mixed temperate forest using imaging spectroscopy
Alice Gravel, Margaret Kalácska, … Étienne Laliberté·Canadian Journal of Remote SensingPeer-reviewed·Jan 4, 2026
- Assessing the impact of data uncertainty on remote sensing estimation of plant functional diversity
Javier Pacheco‐Labrador, Christian Rossi, Maria Joao Santos·bioRxiv·Sep 22, 2026
- Remote sensing-based forest modeling reveals positive effects of functional diversity on productivity at local spatial scale
F. D. Schneider, M. Longo, … P. R. Moorcroft·bioRxiv·Aug 11, 2022