Frontiers in Cellular NeuroscienceNeurosciencePeer-reviewed journal article
On Neural Code: The Self-Information Processor Disguised As Neuronal Variability?
Abstract
One important goal of BRAIN projects is to crack the neural code -- to understand how information is represented in patterns of electrical activity generated by ensembles of neurons. Yet the major stumbling block in the understanding of neural code is neuronal variability - neurons in the brain discharge their spikes with tremendous variability in both the control resting states and across trials within the same experiments. Such on-going spike variability imposes a great conceptual challenge to the classic rate code and/or synchrony-based temporal code. In practice, spike variability is typically removed via over-the-trial averaging methods such as peri-event spike histogram. In contrast to view neuronal variability as a noise problem, here we hypothesize that neuronal variability should be viewed as the self-information processor. Under this conceptual framework, neurons transmit their information by conforming to the basic logic of the statistical Self-Information Theory: spikes with higher-probability inter-spike-intervals (ISI) contain less information, whereas spikes with lower-probability ISIs convey more information, termed as surprisal spikes. In other words, real-time information is encoded not by changes in firing frequency per se, but rather by spikes variability probability. When these surprisal spikes occur as positive surprisals or negative surprisals in a temporally coordinated manner across populations of cells, they generate cell-assembly neural code to convey discrete quanta of information in real-time. Importantly, such surprisal code can afford not only robust resilience to interference, but also biochemical coupling to energy metabolism, protein synthesis and gene expression at both synaptic sites and cell soma. We describe how this neural self-information theory might be used as a general decoding strategy to uncover the brains various cell assemblies in an unbiased manner.
- Citations
- 31
- FWCI
- 1.10
- Field percentile
- top 24%
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Neural code uses self-information principle to organize the brain’s universal cell-assembly coding
Meng Li, Kun Xie, … Joe Z. Tsien·Cerebral CortexPeer-reviewed·Apr 13, 2018
- Spike Reliability is Cell-Type Specific and Shapes Excitation and Inhibition in the Cortex
Simone Russo, Garrett B. Stanley, Farzaneh Najafi·Scientific ReportsPeer-reviewed·Jan 2, 2025
- A simple self-decoding model for neural coding
Thach V. Bui·IEEE International Symposium on Information Theory (ISIT)Peer-reviewed·Jul 7, 2024
- Parsing auditory neural code into maximum-entropy packets
Huanqiu Zhang, Israel Nelken, Tatyana O. Sharpee·bioRxiv·Nov 9, 2025
- Temporal spiking sequences in visual cortex carry unique information about natural movies
Boris Sotomayor-Gómez, Francesco Paolo Battaglia, Martin A. Vinck·bioRxiv·Jun 27, 2023
- Burst coding despite unimodal interval distributions
Ezekiel Williams, Alexandre Payeur, … Richard Naud·bioRxiv·Feb 18, 2021