bioRxivSynthetic BiologyPreprint
Analysis of Circuits for Dosage Control in Microbial Populations
Sophie Jean WaltoniD, Samuel E. ClamonsiD, Richard M. MurrayiD
Abstract
Designing genetic circuits to control the behaviors of microbial populations is an ongoing challenge in synthetic biology. Here we analyze circuits which implement dosage control by controlling levels of a global signal in a microbial population in face of varying cell density, growth rate, and environmental dilution. We utilize the Lux quorum sensing system to implement dosage control circuits, and we analyze the dynamics of circuits using both simplified analytical analysis and in silico simulations. We demonstrate that strong negative feedback through inhibiting LuxI synthase expression along with AiiA degradase activity results in circuits with fast response times and robustness to cell density and dilution rate. We find that degradase activity yields robustness to variations in population density for large population sizes, while negative feedback to synthase production decreases sensitivity to dilution rates.
- Citations
- 0
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Population regulation in microbial consortia using dual feedback control
Xinying Ren, Ania-Ariadna Baetica, … Richard M. Murray·IEEE Conference on Decision and Control (CDC)Peer-reviewed·Dec 1, 2017
- Promoter and transcription factor dynamics tune protein mean and noise strength in a quorum sensing-based feedback synthetic circuit
Yadira Boada, Alejandro Vignoni, Jesús Picó·bioRxiv·Feb 6, 2017
- Regulating population density through antithetic feedback control of cell growth
Giovanni Campanile, Vittoria Martinelli, … Davide Fiore·IFAC Journal of Systems and ControlPeer-reviewed·Feb 9, 2026
- Control of density and composition in an engineered two-member bacterial community
Reed D. McCardell, Ayush Pandey, Richard M. Murray·bioRxiv·May 9, 2019
- Feedback ratiometric control of two microbial populations in a single chemostat
Davide Fiore, Fabio Della Rossa, … Mario di Bernardo·IEEE Control Systems LettersPeer-reviewed·Jun 4, 2021
- Realizing ‘integral control’ in living cells: How to overcome leaky integration due to dilution?
Yili Qian, Domitilla Del Vecchio·Journal of The Royal Society InterfacePeer-reviewed·Feb 1, 2018