A Novel Explainable Fuzzy Clustering Approach for fMRI Dynamic Functional Network Connectivity Analysis
Abstract
Resting state functional magnetic resonance imaging (rs-fMRI) dynamic functional network connectivity (dFNC) analysis has illuminated brain network interactions across many neuropsychiatric disorders. A common analysis approach involves using hard clustering methods to identify transitory states of brain activity, and in response to this, other methods have been developed to quantify the importance of specific dFNC interactions to identified states. Some of these methods involve perturbing individual features and examining the number of samples that switch states. However, only a minority of samples switch states. As such, these methods actually identify the importance of dFNC features to the clustering of a subset of samples rather than the overall clustering. In this study, we present a novel approach that more capably identifies the importance of each feature to the overall clustering. Our approach uses fuzzy clustering to output probabilities of each sample belonging to states and then measures their Kullback-Leibler divergence after perturbation. We show the viability of our approach in the context of schizophrenia (SZ) default mode network analysis, identifying significant differences in state dynamics between individuals with SZ and healthy controls. We further compare our approach with an existing approach, showing that it captures the effects of perturbation upon most samples. We also find that interactions between the posterior cingulate cortex (PCC) and the anterior cingulate cortex and the PCC and precuneus are important across methods. We expect that our novel explainable clustering approach will enable further progress in rs-fMRI analysis and to other clustering applications.
02 /Specification & Classification
Click any tag to browse matching papers- Citations
- 3
- FWCI
- 1.54
- Field percentile
- top 18%
- Organism
- Assay
- Research Focus
- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Explainable Fuzzy Clustering Framework Reveals Divergent Default Mode Network Connectivity Dynamics in Schizophrenia
Charles A. Ellis, Robyn L. Miller, Vince D. Calhoun·Frontiers in PsychiatryPeer-reviewed·Feb 14, 2024
- Pairing Explainable Deep Learning Classification with Clustering to Uncover Effects of Schizophrenia Upon Whole Brain Functional Network Connectivity Dynamics
Charles A. Ellis, Robyn L. Miller, Vince D. Calhoun·Neuroimage ReportsPeer-reviewed·Sep 29, 2023
- Uncovering Effects of Schizophrenia upon a Maximally Significant, Minimally Complex Subset of Default Mode Network Connectivity Features
Masoud Seraji, Charles A. Ellis, … Vince D. Calhoun·Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC)Peer-reviewed·Jul 15, 2024
- A novel method for tri-clustering dynamic functional network connectivity (dFNC) identifies significant schizophrenia effects across multiple states in distinct subgroups of individuals
Md Abdur Rahaman, Eswar Damaraju, … Vince D. Calhoun·Brain ConnectivityPeer-reviewed·May 29, 2021
- Increased excursions to functional networks in schizophrenia in the absence of task
Miguel Farinha, Conceiçāo Amado, … Joana Cabral·Frontiers in NeurosciencePeer-reviewed·Mar 11, 2022
- Aberrant Dynamic Functional Connectivity of Default Mode Network in Schizophrenia and Links to Symptom Severity
Mohammad S.E. Sendi, Elaheh Zendehrouh, … Vince D. Calhoun·Frontiers in Neural CircuitsPeer-reviewed·Mar 18, 2021