bioRxivBioengineeringPreprint
DNA origami 2.0
Abstract
DNA origami is a technique that allows the creation of precise, modular, and programmable nanostructures using DNA. These nanostructures have found use in several fields like biophysics, molecular biology, nanoelectronics, and nanophotonic due to their programmable nature as well as ability to organize other nanomaterials with high accuracy. However, they are fragile and unstable when removed from their optimal aqueous conditions. In contrast, other commonly used bottom-up methods for creating inorganic nanoparticles do not have these issues, but it is difficult to control the shape or spatial organization of ligands on these nanoparticles. In this study, we present a simple, highly controlled method for templated growth of silica on top of DNA origami while preserving all the salient features of DNA origami. Using the polyplex micellization (PM) strategy, we create DNA nanostructures that can withstand salt-free, buffer-free, alcohol-water mixtures, enabling us to control the material growth conditions while maintaining the monodispersity and organization of nanoelements. We demonstrate the growth of silica shells of different thicknesses on brick and ring-shaped DNA origami structures using the standard Stober process. We also demonstrate the thermostability of the silica-coated nanostructures as well as accessibility of surface sites programmed into the DNA origami after the silica growth in the final inorganic nanostructure.
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Customizable silicification of DNA origami nanostructures
Anna V. Baptist, Lasse Guericke, … Amelie Heuer‐Jungemann·bioRxiv·Oct 28, 2025
- Full site-specific addressability in DNA origami-templated silica nanostructures
L. M. Wassermann, M. Scheckenbach, … A. Heuer-Jungemann·bioRxiv·Dec 22, 2022
- Site-directed placement of three-dimensional DNA origami
I. V. Martynenko, E. Erber, … T. Liedl·bioRxiv·Dec 11, 2022
- Low-cost, bottom-up fabrication of large-scale single-molecule nanoarrays by DNA origami placement
R. M. Shetty, S. R. Brady, … A. Gopinath·bioRxiv·Aug 14, 2020
- Nanopore Fingerprinting of Supramolecular DNA Nanostructures
S. Confederat, I. Sandei, … P. Actis·bioRxiv·Jun 23, 2022
- Recycling Materials for Sustainable DNA Origami Manufacturing
Michael Neuhoff, Yuchen Wang, … Wolfgang G. Pfeifer·Nano LettersPeer-reviewed·Sep 24, 2024