bioRxivGeneticsPreprint
Evolutionarily conserved clusters of colon with lung cancer susceptibility loci, linked with most DUSP phosphatase genes, may help to dissect mechanisms of cancer susceptibility
- Citations
- 0
Abstract
We show evolutionarily conserved pairwise genetic linkage and clustering of majority of colon and lung cancer susceptibility QTLs in mice, rats and humans. The patterns of susceptibility or resistance to these two cancers in recombinant congenic mouse strains were concordant and the responsible susceptibility loci closely linked, in spite of completely different carcinogens and protocols used for induction of the two tumors. Most DUSP (Dual specificity phosphatase) genes are linked to these clusters. These data suggest that an important part of colon and lung cancer susceptibility is controlled by related and evolutionarily conserved processes.
- organism: mouse
- organism: rat
- organism: human
- assay: GWAS summary statistics
- research focus: GWAS / association mapping
- research focus: fine-mapping
- approach: statistical model
- approach: benchmark study
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Clustering of colon, lung, and other cancer susceptibility genes with protein tyrosine phosphates and protein kinases in short genomic segments
Lei Quan, Peter Démant·bioRxiv·Nov 7, 2023
- Cross-cancer pleiotropic associations with lung cancer risk in African Americans
Carissa C. Jones, Yuki Bradford, … Melinda C. Aldrich·Cancer Epidemiology Biomarkers & PreventionPeer-reviewed·Mar 20, 2019
- Multi-ancestry meta-analyses of lung cancer in the Million Veteran Program reveal novel risk loci and elucidate smoking-independent genetic risk
Bryan R. Gorman, Sun‐Gou Ji, … Saiju Pyarajan·Nature CommunicationsPeer-reviewed·Oct 4, 2024
- Genetic analysis of lung cancer reveals novel susceptibility loci and germline impact on somatic mutation burden
Aurélie AG Gabriel, Joshua Ronald Atkins, … James McKay·JNCI Journal of the National Cancer InstitutePeer-reviewed·Apr 27, 2022
- Large-scale association study identifies lung cancer susceptibility copy number variants and their potential functional role in genetic instability
Feifei Xiao, Fei Qin, … Christopher Ian Amos·Cancer Epidemiology Biomarkers & PreventionPeer-reviewed·Oct 19, 2026
- Cross-species identification of cancer-resistance associated genes uncovers their relevance to human cancer risk
N. U. Nair, K. Cheng, … E. Ruppin·bioRxiv·May 19, 2021