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Explore 363,000 bioRxiv and medRxiv papers across 26 biological disciplines. Save private star ratings to train your personal recommendation feed, curate reading collections, and check community reproducibility reports before building on a paper's code.
Recent preprints
Tree cavities as attractors: an experimental test of the effects of woodpecker legacy on local bird activity and species richness
Alicja Wolska, Marcin Trybala, Michal Ciach
The paper tests how tree cavities affect bird activity and species richness, finding cavities increase visits and species diversity.
bioRxiv · Nov 9, 2026 · PreprintEcology
Gregariousness can promote invasion success of pest insects while higher environmental heterogeneity decreases it
Magnus Jonsson, Venla Korhonen, Emy Guilbault, Katja Koskenpato, Sophie Van Meyel, Carita Lindstedt
This study shows that gregariousness increases survival of pest insects against predators, while higher environmental heterogeneity reduces predation risk.
bioRxiv · Nov 9, 2026 · PreprintEcology
Disease dynamics during ecosystem restoration and faunal reassembly
Marina Voinson, Diana Erazo, Christina Faust, Nils Bunnefeld, Alfan A Rija, Herwig Leirs, Luisa Paez-Triana, Vincent Sluydts, Joachim Marien, Lucinda Kirkpatrick
This study uses a model to show that disease dynamics during ecosystem restoration depend on pathogen transmissibility, timing of slow life history species establishment, and community assembly, not just biodiversity.
bioRxiv · Nov 9, 2026 · PreprintEcology
Population dynamics in extreme environments: shared histories of strong selection lead to predictable patterns across separate high-elevation populations of small mammals
Nathan R Senner, Brett R Addis, Ryan Mahar, Thomas C Nelson, K Trey Sasser, Rena M Schweizer, Sarah R Senese, Maria Stager, Jonathan P Velotta, Luke R Wilde, Cole J Wolf, Zachary A Cheviron
The paper examines genetic and phenotypic variation in deer mice across elevation gradients, finding predictable patterns in extreme environments that could inform species vulnerability to environmental change.
bioRxiv · Nov 9, 2026 · PreprintEcology
Positive relationships between interspecific association strength and elevational range overlap highlight the role of facilitation in community assembly
Sarthak Mondal, Shambu Rai, Bharat Tamang, Aman Biswakarma, Dambar Kumar Pradhan, Mangal Rai, Aiti Thapa, Dema Tamang, Kabir Pradhan, Vikram Rai, Umesh Srinivasan
The paper examines how facilitation in mixed-species bird flocks influences elevational range overlap, finding positive correlations between association strength and range overlap.
bioRxiv · Nov 9, 2026 · PreprintEcology
Natural regeneration in tree islands drives long-term recovery of native forest-associated woody species in oil palm landscapes
Vivien Michel, Fabian Brambach, Nathaly Guerrero-Ramirez, Dian Muh Fauzan, Bambang Irawan, Leti Sundawati, Dirk Hoelscher, Holger Kreft, Gustavo Brant Paterno
bioRxiv · Nov 9, 2026 · PreprintEcology
Slowed aquatic invasion coincides with intensified research and prevention in Minnesota, USA
Jake R Walsh, Alex W Bajcz, Amy C Kinsley, Nicholas B. D. Phelps
The paper measures the effectiveness of aquatic invasive species prevention in Minnesota by showing slowed invasion rates alongside increased prevention efforts and simulations suggesting a 20-53% reduction in new invasions.
bioRxiv · Nov 9, 2026 · PreprintEcology
A tabular foundation model rivals established species distribution models from presence-only records
Hideyuki Doi, Takeshi Osawa, Narumasa Tsutsumida
This paper evaluates tabular foundation models as species distribution models, finding they perform competitively without per-dataset tuning but are sensitive to biased data.
bioRxiv · Nov 9, 2026 · PreprintEcology
Phenotypic variation in divergent mitochondrial haplotypes in migratory three-spined stickleback
Emma Shepherd, Megan Barnes, Henry Lewis, Ben Fisher, Andrew MacColl
The paper investigates phenotypic differences associated with mitochondrial haplotypes in three-spined stickleback, finding effects on male gonadosomatic index and potential citrate synthase activity.
bioRxiv · Nov 9, 2026 · PreprintEcology
Two decades of EU pesticide substitution have not reduced impacts on stream invertebrates
This study shows that two decades of EU pesticide substitution have not reduced environmental harm to stream invertebrates, as toxic pressure and impairment remained stable over time.
bioRxiv · Nov 9, 2026 · PreprintEcology
Assembly of host-specific bacterial and fungal communities from soil by diverse subaerial green algae
Magdalena W. Slawinska, Barbara Melkonian, Michael Melkonian, José Flores-Uribe, Paloma Durán, Ruben Garrido-Oter
This study shows subaerial green algae from Chlorophyta and Streptophyta assemble distinct phycosphere communities from soil, with host identity driving bacterial composition more strongly than fungal.
bioRxiv · Nov 9, 2026 · PreprintEcology
Interspecific social contacts spread gut microbiota in wild rodent communities
Aura Raulo, Eveliina Hanski, Curt Lamberth, Josh A Firth, Sarah CL Knowles
This study shows that social interactions between different rodent species can spread gut microbiota, with stronger transmission from wood mice to yellow-necked mice.
bioRxiv · Nov 6, 2026 · PreprintEcology
Microscale nonrandomness revisited: An overlooked predictor of ecological change
Takeshi Miki, Kinuyo Yoneya, Ayumi Katayama, Si Ho Han, Housei Nakamura, Shungo Takeda, Hiroto Miyawaki, Tomonori Kume, Kanako Shirotsuka, Shuji Kaneko, Kensuke Seto, Silke Van den Wyngaert, Maiko Kagami
The paper introduces a framework using microscale nonrandomness to predict short-term ecological changes across diverse systems, showing improved predictive performance compared to macroscale variables.
bioRxiv · Nov 6, 2026 · PreprintEcology
Primary vitamin B12 limitation and widespread stress in Antarctic phytoplankton
Robert H Lampe, Deepa Rao, Riss M Kell, Rebecca J Chmiel, Nicole L Schanke, Soo Yoon Kim, Lauren E Lees, Francesco Bolinesi, Olga Mangoni, Raffaella Casotti, Cecilia Balestra, Hong Zheng, Dawn M Moran, Andrew E Allen, Matthew R McIlvin, , Mak A Saito
This study shows that vitamin B12, not iron, is the primary limiting nutrient for phytoplankton in the Southern Ocean, with implications for community composition and function.
bioRxiv · Nov 6, 2026 · PreprintEcology
Invasion analysis for structured populations: analytical principles and numerical workflows
Joe Wan, Hsiang-Chih Lo, Guan-Yu Chen, Shiang-Chi Huang, Jia-Zhen Liu, Chin-Te Tsai, Po-Ju Ke
The paper develops a framework for analyzing invasion in structured populations using analytical and numerical methods to determine invasion success across different ecological scenarios.
bioRxiv · Nov 6, 2026 · PreprintEcology
Examining urban weed response to elevated salt levels
Maximilian M Carroll, Jennifer M Cocciardi, Ava Hoffman, Kelsey Coates, Eric G Yee, Meghan L Avolio
This study examines urban weed response to elevated salt levels through garden experiments, finding some support for salt tolerance adaptation but highlighting environmental heterogeneity and plant variability.
bioRxiv · Nov 6, 2026 · PreprintEcology
Energetic and functional development of soil food webs along secondary succession
Ajuan Zhang, Chengwei Tu, Yuanfei Wang, Jingyi Li, Zheng Zhou, Ruyi Luo, Karin Hohberg, Zhe Chen, Bingxue Zhu, Xueyong Pang, Nico Eisenhauer, Anton Potapov
This study examines energy flux changes in soil food webs during secondary succession, finding shifts from herbivory to detritivory and differences between plantation and natural forest types.
bioRxiv · Nov 6, 2026 · PreprintEcology
Elevational filtering reshapes mountain understory communities through diversity decline, functional shifts, and species replacement
Syed Waseem Gillani, Mushtaq Ahmad, Muhammad Manzoor, Roberto Salguero-Gomez
This study examines how elevation reshapes mountain understory communities through diversity loss, functional shifts, and species replacement across elevational zones.
bioRxiv · Nov 5, 2026 · PreprintEcology
Hidden infections: Linking parasite ecology, fish health and stakeholder perceptions in Nile tilapia aquaculture in central Kenya
Miriam Isoyi Shigoley, Nicolas Antoine-Moussiaux, Thierry Jauniaux, Thomas-Julian Irabor, Gyrhaiss Kapepula Kasembele, Daniel Mungai Ndegwa, Bram J. Vanschoenwinkel, Maarten P. M. Vanhove
The paper investigates parasite infections in Nile tilapia aquaculture, finding that monopisthocotylan parasites are prevalent and linked to gill lesions, while stakeholders rarely identify parasites as a health cause.
bioRxiv · Nov 5, 2026 · PreprintEcology