Author

A. L. Griffen

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 4

Signature Assays, Organisms & Methods

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Organism:human· 4 Assay:metagenomics· 4 Research Focus:cell type annotation· 3 Approach:statistical model· 3 Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:ecology & biodiversity· 1 Approach:experimental assay· 1

Frequent Co-Authors

E. J. Leys· 4 shared C. J. Beall· 3 shared C. Mukherjee· 2 shared R. M. Sulyanto· 2 shared S. B. Hashmi· 2 shared A. Ni· 1 shared C. O. Moyer· 1 shared H. M. Steinkamp· 1 shared

Activity by Year

2018-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

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4 shared papersMicrobiology

E. J. Leys

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Author profile →

4 papers

Recent·Most cited

Fungi and Bacteria Occupy Distinct Spatial Niches within Carious Dentin

R. M. Sulyanto, C. J. Beall, K. Ha, J. Montesano, J. Juang, J. R. Dickson, S. B. Hashmi, S. Bradbury, E. J. Leys, M. Edgerton, S. P. Ho, A. L. Griffen

This study shows fungi and bacteria occupy separate spatial niches in carious dentin, rarely co-colonizing.

bioRxiv · Dec 5, 2023Microbiology

Acquisition of Oral Microbiota is Driven by Environment, Not Host Genetics

C. Mukherjee, C. O. Moyer, H. M. Steinkamp, S. B. Hashmi, X. Guo, A. Ni, E. J. Leys, A. L. Griffen

This study shows that the oral microbiota is transmitted through contact and shared environment, not host genetics, by comparing biological and adoptive mother-child pairs.

Microbiome · Feb 23, 2021Peer-reviewedMicrobiology

Oral bacteriophages are maintained at high levels for months in individuals but infrequently transmitted between mothers and infants

C. J. Beall, R. M. Sulyanto, A. L. Griffen, E. J. Leys

The paper analyzes oral bacteriophages in mother-baby pairs over time, finding that phages are maintained within individuals but rarely transmitted between mothers and infants.

bioRxiv · May 10, 2019 · PreprintMicrobiology

High-resolution ISR amplicon sequencing reveals personalized oral microbiome

C. Mukherjee, C. J. Beall, A. L. Griffen, E. J. Leys

This study introduces ISR amplicon sequencing with DADA2 to achieve high-resolution oral microbiome analysis, revealing personalized and stable microbial communities at the subspecies level.

bioRxiv · May 11, 2018Microbiology