From genotype to antibiotic susceptibility phenotype in Enterobacteriaceae: a clinical perspective
Etienne Ruppé, Abdessalam Cherkaoui, Myriam Girard, Stephane Schicklin, Vladimir Lazarevic, Jacques Schrenzel
This study evaluates the accuracy of predicting antibiotic susceptibility from whole-genomic sequencing in Enterobacteriaceae, finding high concordance rates but some errors due to chromosomal gene overexpression.
bioRxiv · Dec 22, 2018 · PreprintMicrobiology