Author

Abigail Katcoff

Massachusetts Institute of Technology

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:batch correction / integration· 1 Organism:human· 1 Assay:scRNA-seq· 1 Assay:spatial transcriptomics· 1 Approach:statistical model· 1

Frequent Co-Authors

Adityanarayanan RadhakrishnaniD· 1 shared Anastasiya BelyaevaiD· 1 shared Caroline UhleriD· 1 shared G. V. ShivashankariD· 1 shared Karren YangiD· 1 shared Karthik Damodaran· 1 shared Saradha VenkatachalapathyiD· 1 shared

Activity by Year

2021-2021 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 21 mutual co-author links

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1 shared paperBioinformatics

Adityanarayanan RadhakrishnanORCID

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1 paper

Recent·Most cited

Multi-Domain Translation between Single-Cell Imaging and Sequencing Data using Autoencoders

Karren Yang, Anastasiya Belyaeva, Saradha Venkatachalapathy, Karthik Damodaran, Abigail Katcoff, Adityanarayanan Radhakrishnan, G. V. Shivashankar, Caroline Uhler

This paper introduces an autoencoder-based method to integrate single-cell imaging and sequencing data, identifying sub-populations of human naive CD4+ T-cells.

Nature Communications · Jan 4, 2021Peer-reviewedBioinformatics