A De Novo Algorithm for Allele Reconstruction from Oxford Nanopore Amplicon Reads, with Application to CYP2D6
Scott D. Brown, Lisa Dreolini, Agata Minor, Michelle Mozel, Nancy Wong, Sharon Mar, Amanda Lieu, Maimun Khan, Amanda Carlson, Monica Anne Hrynchak, Robert A. Holt, Perseus I. Missirlis
This paper introduces a de novo algorithm to reconstruct allele sequences from Oxford Nanopore amplicon reads, demonstrating its application to CYP2D6 and HLA with high accuracy.
Bioinformatics · Jul 18, 2026Peer-reviewedBioinformatics