Author

Alan Zhang

University of California, Santa Cruz

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:phylogenetics / evolution· 1 Approach:statistical model· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Alexander KrameriD· 1 shared Angie S. HinrichsiD· 1 shared Bianca De SanctisiD· 1 shared Lily KarimiD· 1 shared Nicolás AyalaiD· 1 shared Russell B Corbett-DetigiD· 1 shared Sumit WaliaiD· 1 shared Yatish TurakhiaiD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 28 mutual co-author links

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1 shared paperBioinformatics

Alexander KramerORCID

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1 paper

Recent·Most cited

Panmap: Scalable phylogeny-guided alignment, genotyping, and placement on pangenomes

Alexander Kramer, Alan Zhang, Nicolás Ayala, Bianca De Sanctis, Lily Karim, Angie S. Hinrichs, Sumit Walia, Yatish Turakhia, Russell B Corbett-Detig

Panmap efficiently aligns, genotypes, and places reads on large pangenomes using phylogenetic compression, enabling rapid analysis of up to 8 million genomes.

bioRxiv · Mar 30, 2026 · PreprintBioinformatics