Author

Alex Greninger

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Microbiology· 2

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:statistical model· 2 Organism:bacteria (other)· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Research Focus:host-pathogen & immune response· 1 Organism:human· 1

Frequent Co-Authors

Amanda L Adler· 1 shared Danielle M Zerr· 1 shared Guillaume JospiniD· 1 shared James P. Watt· 1 shared Janet A Englund· 1 shared Jonathan A. EiseniD· 1 shared Keith R Jerome· 1 shared Varvara K. Kozyreva· 1 shared

Activity by Year

2016-2017 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperMicrobiology

Amanda L Adler

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Rapid metagenomic next-generation sequencing during an investigation of hospital-acquired human parainfluenza virus 3 infections

Alex Greninger, Danielle M Zerr, Xuan Qin, Amanda L Adler, Janet A Englund, Keith R Jerome

This study uses metagenomic next-generation sequencing to rapidly detect and trace hospital-acquired human parainfluenza virus 3 infections, identifying potential transmission within a medical unit.

Journal of Clinical Microbiology · Jan 1, 2017Peer-reviewedMicrobiology

Recent Outbreaks of Shigellosis in California Caused by Two Distinct Populations of Shigella sonnei With Increased Virulence or Fluoroquinolone Resistance

Varvara K. Kozyreva, Guillaume Jospin, Alex Greninger, James P. Watt, Jonathan A. Eisen, Vishnu Chaturvedi

The paper investigates two distinct Shigella sonnei populations in California outbreaks, identifying increased virulence and fluoroquinolone resistance as key factors.

mSphere · Dec 28, 2016Peer-reviewedMicrobiology