Author

Allen Soberanes

Massachusetts Institute of Technology

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:clustering· 1 Research Focus:dimensionality reduction· 1 Organism:human· 1 Organism:mouse· 1 Approach:statistical model· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Aditi A. ShirkeiD· 1 shared Duanduan MaiD· 1 shared Faith S. Kim· 1 shared Xiaofeng A. SuiD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

4 top collaborators · 6 mutual co-author links

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1 shared paperBioinformatics

Aditi A. ShirkeORCID

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1 paper

Recent·Most cited

Streamline CNV - A Handy Nextflow Pipeline for Chromosomal Copy Number Variation Analysis

Duanduan Ma, Allen Soberanes, Faith S. Kim, Aditi A. Shirke, Xiaofeng A. Su

Streamline CNV is a Nextflow pipeline for CNV analysis that simplifies processing, visualization, and interpretation of copy number data across various sequencing types and species.

bioRxiv · Oct 23, 2026 · PreprintBioinformatics