Author

Anamay Samant

ETH Zurich

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Bioinformatics· 2

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:cell type annotation· 2 Assay:CITE-seq· 1 Approach:deep learning· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Organism:mouse· 1 Assay:proteomics· 1 Approach:statistical model· 1

Frequent Co-Authors

Alexander YermanosiD· 2 shared Daphne van GinnekeniD· 2 shared Sai T. ReddyiD· 2 shared Andreas AgrafiotisiD· 1 shared Evgenios Kladis· 1 shared Karlis Daga-Krumins· 1 shared Lucas Stalder· 1 shared Sophie Bakker· 1 shared

Activity by Year

2025-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 33 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersBioinformatics

Alexander YermanosORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Delineating inter- and intra-antibody repertoire evolution with AntibodyForests

Daphne van Ginneken, Valentijn Tromp, Lucas Stalder, Tudor‐Stefan Cotet, Sophie Bakker, Anamay Samant, Sai T. Reddy, Alexander Yermanos

AntibodyForests quantifies inter- and intra-antibody repertoire evolution using protein language models and structure analysis.

Bioinformatics · Oct 1, 2025Peer-reviewedBioinformatics

Protein language model pseudolikelihoods capture features of in vivo B cell selection and evolution

Daphne van Ginneken, Anamay Samant, Karlis Daga-Krumins, Wiona Sophie Glänzer, Andreas Agrafiotis, Evgenios Kladis, Sai T. Reddy, Alexander Yermanos

This study shows that protein language model pseudolikelihoods correlate with B cell selection features like SHM and isotype usage, but not binding affinity, in vivo.

Briefings in Bioinformatics · Jul 1, 2025Peer-reviewedBioinformatics