Author

Andres Stucky

University of Southern California

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 1 Molecular Biology· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Organism:human· 2 Approach:statistical model· 2 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Parish Paymon SedghizadehiD· 2 shared Xuelian CheniD· 2 shared Andrea Chang· 1 shared Atlas KhaniD· 1 shared Daniel Adelpour· 1 shared Evelyn F. Zhong· 1 shared Jiang F. ZhongiD· 1 shared Kai WangiD· 1 shared

Activity by Year

2018-2020 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

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2 shared papersMolecular Biology

Parish Paymon SedghizadehORCID

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2 papers

Recent·Most cited

Genomic study of oral lichen planus and oral microbiome with RNAseq

Evelyn F. Zhong, Andrea Chang, Andres Stucky, Xuelian Chen, Tarun Mundluru, Mohammad Khalifeh, Parish Paymon Sedghizadeh

This study identifies HNF4A network activation and potential pathogens in OLP patients using RNAseq and microbial profiling.

bioRxiv · Feb 12, 2020 · PreprintMolecular Biology

VirTect: a computational method for detecting virus species from RNA-Seq and its application in head and neck squamous cell carcinoma

Atlas Khan, Qian Liu, Xuelian Chen, Yunjing Zeng, Andres Stucky, Parish Paymon Sedghizadeh, Daniel Adelpour, Xi Zhang, Kai Wang, Jiang F. Zhong

VirTect detects virus species from RNA-seq data in head and neck squamous cell carcinoma, identifying 22 HPV-induced cases with better accuracy than existing methods.

bioRxiv · Feb 26, 2018 · PreprintBioinformatics