Author

Andrey Novichkov

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Synthetic Biology· 1

Signature Assays, Organisms & Methods

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Approach:deep learning· 1 Research Focus:protein design· 1 Assay:proteomics· 1

Frequent Co-Authors

Aadyot Bhatnagar· 1 shared Alexander J. MeeskeiD· 1 shared Ali MadaniiD· 1 shared Benjamin P. KleinstiveriD· 1 shared Emily HilliD· 1 shared Gabriella O. EstevamiD· 1 shared Jeffrey A. RuffoloiD· 1 shared Joseph P. GallagheriD· 1 shared

Activity by Year

2025-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperSynthetic Biology

Aadyot Bhatnagar

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1 paper

Recent·Most cited

Engineering of CRISPR-Cas PAM recognition using deep learning of vast evolutionary data

Stephen Nayfach, Aadyot Bhatnagar, Andrey Novichkov, Gabriella O. Estevam, Nahye Kim, Emily Hill, Jeffrey A. Ruffolo, Rachel A. Silverstein, Joseph P. Gallagher, Benjamin P. Kleinstiver, Alexander J. Meeske, Peter Cameron, Ali Madani

This paper introduces Protein2PAM, a deep learning model that predicts CRISPR-Cas PAM specificity from protein sequences, enabling the design of Cas variants with tailored PAM recognition.

bioRxiv · Jan 6, 2025 · PreprintSynthetic Biology