Author

Atul J Deshpande

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:clustering· 1 Research Focus:differential expression· 1 Organism:human· 1 Assay:scRNA-seq· 1 Assay:spatial transcriptomics· 1 Approach:statistical model· 1 Research Focus:trajectory inference· 1

Frequent Co-Authors

Archana BalaniD· 1 shared Bingrui Emily Xie· 1 shared Elana Judith FertigiD· 1 shared Ezra G. BarabaniD· 1 shared Genevieve Stein-O’BrieniD· 1 shared James BrugarolasiD· 1 shared Kathleen NolleriD· 1 shared Michael F. Ochs· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperCancer Biology

Archana BalanORCID

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1 paper

Recent·Most cited

Clear cell renal cell carcinoma consensus transcriptomic programs reveal converging trajectories towards aggressive disease

Roy M. Elias, Vivek Nimgaonkar, Bingrui Emily Xie, Yuqi Zhang, Archana Balan, Kathleen Noller, Nirmish Singla, Yasser M. A. Ged, Ezra G. Baraban, Payal Kapur, James Brugarolas, Genevieve Stein-O’Brien, Michael F. Ochs, Elana Judith Fertig, Atul J Deshpande, Srinivasan Yegnasubramanian

The paper identifies 17 consensus transcriptomic programs in ccRCC using NMF and links them to cellular sources and clinical outcomes, revealing converging trajectories toward aggressive disease.

The Oncologist · Sep 1, 2026Peer-reviewedCancer Biology