Author

Avneet Shaheed

University of California, San Francisco

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Approach:statistical model· 1

Frequent Co-Authors

Alexis J. CombesiD· 1 shared Allison M. WeakleyiD· 1 shared Brittany R. DavidsoniD· 1 shared Cecilia A. NoeckeriD· 1 shared Christina A. EkstrandiD· 1 shared Diana Marquez· 1 shared Elizabeth E. McCarthyiD· 1 shared Feiqiao Brian YuiD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperImmunology

Alexis J. CombesORCID

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1 paper

Recent·Most cited

Coordinated variation in the immune systems and microbiomes of healthy humans is linked to tonic interferon states

Joël Babdor, Ravi K. Patel, Brittany R. Davidson, Kelvin L. Koser, Cecilia A. Noecker, Maha K. Rahim, Jordan E. Bisanz, Iliana Tenvooren, Diana Marquez, Maria Calvo, Vrinda Johri, Elizabeth E. McCarthy, Avneet Shaheed, Christina A. Ekstrand, Allison M. Weakley, , Matthew H. Spitzer

The paper identifies coordinated variation between immune systems and microbiomes in healthy humans, linking it to tonic interferon states.

Cell · Mar 9, 2026Peer-reviewedImmunology